Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	51598	12764515	6517	0.028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	12768450	12780450	3	-1.0285
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	12780640	12815095	29	-0.0921
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	12832564	13104121	12	0.5352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	13105186	13317269	21	-0.0338
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	13317495	13340609	4	-1.2056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	13344291	16021930	1814	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	16022502	16026826	9	0.7419
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	16027553	25455878	5731	0.0192
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	25455928	25518771	25	0.7186
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	25519276	25560174	22	0.3466
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	25560863	30948211	2751	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	30948263	30996244	39	0.3085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	31001777	61886594	18617	0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	61886769	61890775	3	-2.9443
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	61892397	72541504	7267	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	72541524	72583736	45	-0.5347
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	72584492	110029038	23621	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	110034497	110041701	17	1.3489
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	110044476	147159969	8326	0.0119
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	147173241	147515336	140	-0.594
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	147515351	150822330	1524	0.0178
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	150822391	150852862	30	-1.3332
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	150852902	151023162	170	0.0387
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	151023398	151035194	40	0.4007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	151035324	194981496	29430	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	194994473	195016444	28	-0.5902
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	195016458	195089940	70	0.0263
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	195090236	195183422	67	0.5272
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	195190503	227877792	21727	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	227883479	227886819	3	-2.0771
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	227887079	246804070	13847	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	246815817	246862475	31	-0.6511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	1	246863745	247191011	146	0.0355
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	2784	756217	536	0.0378
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	759886	768701	7	0.8536
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	774784	2606258	1231	0.0512
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	2607849	2611035	2	-1.4611
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	2611159	34538784	22262	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	34544573	34591060	49	0.3394
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	34591536	35829477	871	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	35831294	35841420	6	0.9307
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	35841451	40842768	3746	0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	40843820	40844942	4	1.0924
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	40845310	49386546	6089	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	49389272	49394694	5	-1.0276
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	49398545	52595241	2274	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	52597429	52635046	41	-1.6917
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	52641453	79182654	17153	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	79184286	79196319	8	1.2088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	79197326	86791198	4705	0.0121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	86806581	86807365	2	-1.8171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	86823917	97221654	2103	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	97229064	97240900	14	-0.8229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	97250052	97484644	23	-0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	97507179	97528142	8	1.097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	97528621	127558707	17962	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	127558794	127574416	12	0.843
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	127575116	146578555	11489	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	146580874	146583404	24	-1.0995
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	146594276	185024921	23623	-0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	185025125	185026291	2	2.327
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	2	185026796	242738129	35301	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	35345	53003415	35656	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	53006776	53014156	36	-0.452
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	53014257	75651239	16949	0.001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	75655239	75669495	6	-1.7419
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	75677871	162998291	49304	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	162998321	162998343	2	1.7238
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	162998638	163699715	474	-0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	163701038	163701099	4	0.9751
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	163701114	163990962	195	0.02
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	163995351	164098609	64	-0.9016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	164106536	164339809	159	-0.0325
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	164340083	164432149	82	-0.7798
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	164432152	194363281	18889	-0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	194363420	194369129	12	-0.6956
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	3	194369152	199380515	2700	-0.01
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	2281	4164822	1702	0.0114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	4169858	4170587	2	-1.4347
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	4173729	9819488	4087	0.0309
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	9832514	9840347	27	-1.24
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	9840596	9883300	58	0.0274
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	9883724	9885080	4	-1.5874
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	9885450	20981667	8142	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	20981682	20994307	10	-0.7767
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	20994352	69057550	28195	-0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	69057755	69168574	62	-1.0435
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	69171930	87042729	10692	-0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	87044581	87055431	6	-0.9352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	87055447	104965020	10653	-0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	104971079	104971086	5	1.18
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	104971093	153009236	28381	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	153010983	153011996	11	-1.0224
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	153012017	153014309	5	0.5417
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	153014838	153209050	183	-0.0185
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	153209736	153212191	5	-1.0401
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	153213580	162080381	5638	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	162083343	162151102	87	0.7136
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	162151346	173224503	7012	-0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	173225723	173237396	16	0.7557
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	4	173238406	191261904	12068	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	68532	751505	311	0.0924
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	770379	775396	6	-0.9072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	777727	10782743	8364	0.0191
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	10782757	10801788	21	0.4276
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	10801910	12838262	1474	0.0155
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	12843869	12873076	13	0.7672
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	12877411	15769127	1974	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	15771492	15773597	12	-0.7305
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	15776346	21486957	3545	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	21487034	21488195	4	-1.7432
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	21488253	46227641	14958	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	46231640	46245056	5	-1.04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	46245639	46287063	12	0.0473
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	46306765	46309259	8	0.8946
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	46313969	57357403	5065	-0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	57361784	57369290	32	1.4401
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	57374114	177131055	74874	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	177160157	177165211	3	2.4005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	5	177187571	180722926	1997	0.0227
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	94661	21063922	16147	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	21064639	21067560	2	1.5599
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	21067986	29891043	5480	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	29891198	29897150	3	-1.175
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	29906438	29945167	57	0.0185
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	29945293	29945437	2	-1.8548
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	29945456	31388802	684	0.056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	31394255	31403932	8	1.1779
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	31403966	79019608	27539	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	79025784	79082863	96	0.3455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	79083220	95247444	10352	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	95249827	95254108	4	0.9822
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	95256897	103841522	5084	0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	103844669	103868754	46	0.6105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	103872163	160952555	36808	-0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	160952709	160953273	5	1.0927
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	6	160988032	170892930	7240	0.0247
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	52911	178739	37	0.4681
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	178906	33136713	23718	0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	33144561	33144714	2	-2.4518
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	33145170	38323848	3692	-0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	38324752	38325253	3	1.3529
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	38325481	70058374	17289	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	70061186	70064077	2	-2.0283
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	70066179	98378059	16365	-0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	98381044	98381579	2	1.7944
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	98382719	142154515	26497	-0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	142156294	142159298	8	-2.48
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	142159383	142165422	17	-1.2876
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	142165554	154020828	7314	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	154024104	154030546	4	-1.5438
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	154031763	157414564	2357	0.0211
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	157417209	157417240	2	-1.4406
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	7	157420053	158819765	875	0.0705
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	21254	5928898	6527	0.0263
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	5929919	5929944	2	-2.1511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	5930107	6923230	1236	0.0182
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	6923353	7825372	207	-0.3095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	7836168	8091754	68	0.0824
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	8092670	8109713	3	-1.2773
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	8124554	11986960	3217	0.0181
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	12025135	12038532	6	-1.0935
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	12071716	12276652	12	-0.0369
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	12276787	12291857	37	0.3475
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	12305298	12464526	55	-0.1256
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	12464546	12526350	17	-0.6457
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	12526418	24200953	9724	-0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	24201375	24207011	4	-1.3791
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	24207453	24257545	31	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	24257695	24258304	2	-2.7105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	24260476	25030360	613	-0.0137
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	25030393	25040250	26	0.3938
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	25047021	39349816	8990	-0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	39354760	39462106	38	0.5867
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	39471779	39475546	3	-0.5923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	39475878	39506122	17	0.5598
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	39507456	40303707	597	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	40303899	40304007	2	1.5557
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	40304029	40891153	472	-0.0263
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	40897009	40897628	2	-1.7513
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	40902837	65011190	12546	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	65011451	65011672	6	2.0806
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	65012064	144770300	50656	-0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	144776300	144778951	9	-1.1974
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	8	144790132	146268959	503	0.036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	36587	592903	510	0.0244
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	596699	596893	3	-1.987
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	596961	23351805	19854	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	23353115	23363484	8	-1.5247
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	23368488	28293383	3761	0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	28293495	28301629	5	1.0863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	28302061	29084549	556	-0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	29084997	29087680	2	1.5403
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	29090799	44181813	6625	0.0124
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	44183430	44936301	71	0.58
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	44936428	67673801	140	0.2133
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	67675871	67675877	4	2.5801
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	67675879	95509918	18318	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	95510532	95510778	2	-2.1273
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	9	95512767	140211215	29805	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	62759	34104072	26077	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	34104299	34106624	2	-1.532
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	34106708	35160920	735	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	35162741	35163634	4	-1.4268
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	35166282	46475660	4717	0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	46475717	46479232	12	0.6413
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	46479394	47059216	110	0.2188
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	47062274	47173300	155	0.5639
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	47173619	47241036	9	0.1441
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	47417400	47433407	3	-1.8207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	47468066	66976282	12758	0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	66977929	66984452	28	0.6856
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	66992801	81439930	9256	0.0111
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	81452221	81582965	13	-0.7582
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	81583463	124334099	29022	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	124334213	124336904	3	-3.9246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	10	124336968	135356694	7910	0.0264
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	188510	4405896	1891	0.0343
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	4407843	4409626	6	-1.0496
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	4412531	4926819	581	-0.0136
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	4926853	4933069	32	-1.0596
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	4933110	22969601	13649	0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	22970007	23001168	23	0.4244
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	23001950	33351132	6907	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	33352911	33378607	19	0.4447
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	33379080	54722184	11227	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	54726437	54738787	5	-1.9796
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	54766051	55119916	202	0.0318
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	55130608	55232215	74	0.3671
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	55232377	91470137	21314	0.0095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	91470306	91470691	2	1.9067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	91472352	92610413	872	0.0147
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	92611405	92612083	2	-2.1272
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	11	92618713	134449982	30068	0.008
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	20703	1470927	849	0.0648
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	1474912	1542285	38	0.321
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	1542753	2106150	377	0.0363
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	2116123	2124532	28	0.3849
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	2124561	7902864	4083	0.014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	7903734	8015167	53	0.5038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	8022225	8333552	145	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	8340379	8340484	2	2.1869
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	8344733	8449903	40	0.0554
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	8450059	8465926	13	0.6049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	8466290	9521823	570	0.0214
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	9525137	9619559	24	0.9228
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	9626236	10471727	634	-0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	10474634	10478587	3	-2.0818
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	10479792	33192828	15947	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	33192907	33199764	26	0.4398
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	33199809	33278024	42	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	33280096	33286409	4	-2.762
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	33286685	41453448	3902	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	41454912	41454998	2	-2.6762
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	41455170	62396300	12338	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	62397804	62422921	12	-0.5953
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	62429455	103905238	26588	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	103908106	103908134	2	1.7515
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	103909029	112839456	5674	0.0103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	112840357	112882618	41	0.4078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	112883520	125691333	8430	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	125691697	125696445	2	1.6589
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	125696993	126141646	393	0.0092
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	126151319	126151541	5	-1.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	12	126151807	132288262	4566	0.06
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	13	17924949	114126499	64032	0.0086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	18072124	42167616	14708	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	42168661	42176810	3	1.3767
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	42178885	43571678	803	-0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	43572967	43600205	19	-0.9439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	43602046	73065527	18680	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	73070876	73090732	9	-1.1079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	73099653	85610346	8322	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	85617792	85641263	10	-0.976
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	85658450	105786375	12510	0.0095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	105786534	105798514	9	-0.731
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	105799207	105822329	10	0.1318
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	105824904	105824912	3	1.5589
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	105825048	105867070	16	0.1386
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	105867273	105892781	10	-1.2647
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	105896961	106197470	176	0.089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	106197694	106209261	12	-1.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	14	106210547	106356482	116	0.0572
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	18276341	18466953	48	-0.0779
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	18476969	18841469	55	0.2845
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	18841576	19794591	209	0.5375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	19803370	20088838	108	0.2521
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	20224763	20399235	67	-0.4548
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	20402719	20675140	205	-0.8391
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	20676330	20839790	35	-0.4149
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	20842241	82331721	37974	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	82331742	82334429	5	-1.7773
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	15	82334554	100286563	13216	0.0124
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	777	14957159	11120	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	14957386	15023758	55	-0.5626
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	15032942	16475701	598	0.0626
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	16492765	16564961	11	0.8455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	16571077	22465433	3040	0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	22465812	22612021	71	-0.2805
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	22618243	54354095	12392	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	54355723	54356280	3	2.8345
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	54361849	54387058	16	0.5598
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	54387091	69521229	9104	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	69522787	69528612	3	-1.2343
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	16	69529210	88815036	15984	0.0219
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	526	848711	466	0.0674
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	849072	908650	20	0.5075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	910859	15452858	9521	0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	15453791	15487515	5	-1.7679
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	15495003	31429427	8323	0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	31435765	31897435	72	0.3485
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	31897503	41522088	5060	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	41522239	42107462	170	-0.4504
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	42107479	74162972	19482	0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	74165735	74166513	5	-1.6826
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	74166605	76243458	1124	0.0461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	76244388	76248774	2	2.1579
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	17	76248895	78643088	961	0.0364
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	18	1543	64897521	42454	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	18	64897537	64902744	20	-0.7743
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	18	64902776	76116029	8154	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	41910	15642246	6617	0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	15642357	15660276	21	0.531
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	15660343	15662610	14	-0.1601
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	15668212	15684604	7	0.9003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	15685071	20385329	2318	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	20385941	20508229	74	-0.7392
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	19	20512721	63789666	20260	0.0132
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	9305	1509580	1203	0.0425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	1509667	1541893	40	1.947
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	1545946	23444724	17022	0.01
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	23444874	23446207	2	1.7574
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	23446531	52115017	16707	0.0156
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	52115237	52115335	5	-1.7487
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	20	52115665	62426597	7402	0.0221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	21	9758742	13790340	304	-0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	21	13796570	13803897	2	-1.689
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	21	13804374	22573005	6138	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	21	22577771	22586529	9	-4.391
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	21	22588870	46921385	17874	0.0122
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	14432528	14457141	6	0.563
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	14482342	14805217	56	-0.2714
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	14824867	22674422	4553	0.0557
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	22680529	22726814	19	-0.8484
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	22731529	37693565	10856	0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	37693630	37705253	23	-0.4421
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	37719574	41139620	1841	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	41145242	41158687	11	0.5805
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	22	41159011	49581321	6160	0.0375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	108477	87163586	45738	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	87164832	87165217	2	-3.921
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	87165349	102629372	8040	-0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	102635237	102663756	21	0.8395
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	102667170	111004078	4366	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	111004617	111015797	2	-2.1094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	111016888	112642953	991	-0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	112642982	112643899	4	-2.6364
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	X	112646632	154835548	24904	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A12_1230982	Y	2710438	57427647	8588	-0.8152
