Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	3208470	5999008	1884	-0.0695
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	6001979	6002217	2	-1.425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	6002289	71124473	36618	-0.0396
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	71124475	71124792	2	-1.5199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	71125458	90605280	11589	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	90608525	90614070	8	-0.9283
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	90615182	95291879	2779	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	95295706	95297091	3	-1.1123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	95303587	219803502	59314	0.1365
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	219804140	219806433	2	1.8175
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	1	219806478	245880329	16307	0.1612
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	2	474222	242124735	130754	-0.0384
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	3	526235	25713237	13967	-0.0962
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	3	25719472	25720364	2	-3.9076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	3	25721029	157655449	71099	-0.0644
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	3	157658278	157659408	4	-1.4034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	3	157660369	199023074	20888	0.1604
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	4	1043934	42287415	25435	-0.1146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	4	42287997	42293870	7	-0.9371
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	4	42297251	85702974	21026	-0.0685
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	4	85704353	85705077	3	-2.131
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	4	85706035	189836143	55793	-0.139
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	967233	60606765	32263	-0.0123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	60608904	60612617	8	-1.2232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	60617128	100659230	20415	-0.043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	100661604	100661637	2	-1.4838
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	100661966	102093080	589	-0.052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	102098781	102100360	2	-2.9317
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	102104449	170753508	41682	-0.0461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	170761370	170765242	3	1.5312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	170765315	172426050	933	-0.0699
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	172430472	172431259	2	-1.7347
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	5	172435977	180293075	4133	-0.0544
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	6	959281	27190847	17764	-0.1076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	6	27191408	27198383	4	-1.3974
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	6	27202935	170745844	78290	-0.1845
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	7	671810	119946032	60716	0.2511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	7	119953007	158077879	20282	-0.1054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	607667	4101864	1814	0.3459
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	4197548	4198779	4	-0.4499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	4199155	6620020	1120	0.3429
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	6626309	12842637	2298	2.3602
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	12843334	12971578	111	1.9899
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	12972031	82804067	39364	0.2898
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	82815124	82888756	50	-0.3112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	82892229	90265901	3725	0.3114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	90266065	90493190	197	-0.2452
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	8	90495434	145304484	32516	0.2936
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	779932	24694689	15110	-0.3398
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	24696508	32090704	4021	-0.0485
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	32094280	32111628	29	-1.0618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	32117551	90134084	17888	-0.0659
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	90136693	90141985	4	-1.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	90142626	122321729	21362	-0.064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	122323393	122645922	170	-0.3761
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	9	122647650	140058573	9158	-0.0466
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	405240	24803260	16987	0.0859
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	24805952	24999430	131	-0.2524
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	25004006	56214535	15144	0.1244
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	56214810	75559988	10985	0.3883
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	75562681	75857804	129	-0.047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	75858337	78033352	1341	0.3156
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	78037838	79312069	1019	-0.0807
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	79316081	82002079	1282	0.6872
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	82002421	92134289	6755	-0.0695
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	92137863	92162524	25	-0.6548
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	92162585	106672502	8187	-0.0824
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	106675143	106675163	2	1.4042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	10	106675421	135075077	18570	0.0952
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	446120	34397499	21544	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	34398836	34879440	337	1.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	34881467	36907937	1611	1.6153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	36908255	37878348	140	1.0649
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	37878488	38285360	221	0.0098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	38287155	38747037	269	1.0245
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	38750719	40775075	1244	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	40777898	41551488	582	1.2138
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	41553540	41553790	2	-0.214
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	41554085	41933085	263	1.3391
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	41944481	42009580	15	-0.0886
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	42011942	42953771	653	0.3991
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	42956028	45167865	1573	1.0553
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	45175570	45946446	472	-0.0571
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	45947392	47562003	640	0.3413
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	11	47562437	133647740	47393	-0.0233
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	12	760163	23743089	13291	0.119
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	12	23749488	27680915	2567	1.2395
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	12	27681204	31890842	2673	0.1088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	12	31963813	32055297	73	0.4382
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	12	32068537	131671419	55061	0.0339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	18348806	32965734	8903	-0.0745
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	32966981	34412196	1014	0.8372
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	34416102	34539669	50	0.5247
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	34540663	35134428	313	0.1635
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	35134650	35144887	10	1.0799
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	35149510	35968420	600	0.0757
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	35971781	36419714	347	0.5612
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	36420221	36964671	365	0.2811
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	36964788	40654643	2474	-0.1234
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	40657864	41667156	623	0.2746
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	41667294	41667455	3	-0.5682
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	41667830	43546656	1137	0.2618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	13	43553842	114005560	40517	-0.1189
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	14	19571208	105059083	49229	-0.0407
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	15	21238778	99701830	44373	-0.1568
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	16	593460	87907437	40712	-0.2365
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	17	933971	78510305	36883	-0.0922
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	18	319586	75210228	42466	-0.0943
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	235018	1326355	192	0.135
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	1327723	10581276	3324	-0.1502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	10582660	16234071	2639	0.1689
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	16242945	21886188	1915	-0.1508
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	21891510	33337233	1178	0.153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	33337560	33344584	14	-0.31
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	33347833	46803066	7886	0.1529
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	46803278	50731788	1542	-0.1448
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	50734350	54336405	1485	0.162
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	54340863	58288983	1457	-0.164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	19	58363849	63570038	2272	0.1678
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	20	403764	61690281	37177	0.2923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	14269492	16233580	1173	-0.3564
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	16241417	18153569	1143	0.2054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	18153811	18165239	11	-0.5988
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	18168337	19483092	891	0.2236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	19484727	19958518	352	-0.339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	19962112	22452625	1720	-0.0491
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	22459741	22606528	37	-0.3268
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	22606678	25567799	1575	0.0405
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	25568408	28118728	1861	-0.3634
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	28120169	30879179	1810	-0.0509
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	30887132	31482397	277	0.2074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	31483755	33513025	1357	-0.364
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	33513602	33888636	226	0.23
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	33893327	42418778	6155	-0.363
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	42419774	43403121	702	0.1971
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	43403340	44931711	582	-0.0382
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	21	44931821	46503202	631	-0.3677
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	22	15803930	47717016	16884	-0.1534
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	3167107	81228936	30916	-0.0431
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	81231207	81415420	63	0.5801
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	81415712	81487963	26	0.0857
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	81488881	81704668	87	0.5682
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	81708089	81846364	65	1.2236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	81846735	82071641	117	0.5606
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	82074625	83545825	660	-0.0498
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	83549145	83677515	74	0.3469
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	83679913	94172442	4149	-0.0413
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	94174854	95946320	264	0.2726
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	95946746	96330103	234	-0.0286
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	96331531	96612748	130	0.7048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	96613423	96650503	18	1.3912
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	96731899	102300977	2773	-0.0411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	102302801	102899981	288	0.9178
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	102900898	104244554	613	-0.0385
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	104248255	104849101	320	0.5232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	104856527	104868269	8	1.3796
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	104871244	105127709	120	0.5928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	105131237	105235028	61	1.3585
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	105238365	105685842	176	1.0364
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	105688276	106729780	283	1.3063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	106732508	106843486	49	1.7342
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	106847419	107064153	108	1.4339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	107065344	107215272	82	0.5436
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	107215519	109671345	1256	-0.0203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	109681889	110636504	533	0.5557
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	110731444	129450016	9060	-0.036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	129456200	129873505	194	1.1312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	129874377	136519326	2681	-0.0613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	136520042	136906628	184	0.2316
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	136907723	136978846	53	-0.1145
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	136991554	137104788	67	0.862
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B09_1230996	X	137110080	154558783	7711	-0.0511
