Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	3218610	10551685	4117	-0.0357
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	10560595	10563523	2	-1.5728
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	10563536	29856844	9664	-0.1275
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	29856989	29859057	2	-2.0735
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	29859134	35031570	2908	-0.1178
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	35038296	35042498	4	-1.7114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	35043034	61382679	15096	-0.0127
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	61383717	61384097	3	-1.3118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	61384477	105999870	26857	0.0461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	106090935	106256426	83	-0.7997
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	106269170	166262028	18378	0.1929
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	166262787	166263088	2	-1.1788
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	166267837	167681988	1082	0.214
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	167684616	189673815	13608	-0.0873
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	189679456	189680603	6	-1.3768
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	189684184	194195989	2830	-0.0255
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	194196605	194201122	4	-1.7885
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	1	194201170	247813706	33751	0.0405
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	484222	227432049	121745	-0.0493
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	227434774	231445303	2367	-0.2781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	231450233	233023009	711	0.0109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	233023072	236707443	2315	-0.3099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	236708166	239301624	1653	-0.0304
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	239305290	240890343	850	-0.3286
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	2	240890391	242476062	844	-0.0367
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	3	2212571	172704171	93315	0.039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	3	172707070	188675937	8253	0.2925
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	3	188677109	188677433	2	-1.2523
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	3	188677984	197538677	4250	0.2858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	4	1053934	88067504	47902	-0.0782
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	4	88067584	88068278	2	-1.4955
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	4	88068531	185463608	52673	-0.0171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	4	185467354	185467595	2	-2.1962
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	4	185473157	188763651	1560	-0.1451
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	914233	15264306	9785	0.3753
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	15267716	43161877	15065	0.0224
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	43164060	43169375	9	-0.7909
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	43172896	74836625	14526	-0.1023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	74839336	74849785	7	-1.5726
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	74850192	116441570	22150	-0.174
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	116446061	127037482	6175	0.0993
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	127037651	127433798	224	0.3694
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	127441620	162402212	21271	0.0355
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	162404919	162405133	2	-3.0248
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	162406771	167396689	3166	-0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	167397009	167397039	2	-1.8896
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	5	167397540	180360469	7513	-0.0928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	1014281	20061523	13381	0.1474
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	20064013	20064599	4	-0.9584
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	20065970	92593238	37190	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	92594051	119608409	14753	-0.2468
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	119622679	153560580	21035	0.0309
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	153565526	153565654	2	-0.707
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	153572513	154872080	921	-0.1419
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	154874486	154877535	2	-1.8261
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	6	154878380	170903919	8617	-0.158
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	7	705284	86661956	44155	0.0603
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	7	86663545	86675928	5	0.5526
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	7	86678160	125707281	19586	0.1761
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	7	125707685	158385118	17166	-0.1319
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	8	617667	18899170	9771	-0.0248
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	8	18899308	18935043	38	0.322
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	8	18935647	52545558	17264	-0.0243
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	8	52558395	52587029	30	0.457
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	8	52590704	145232496	53989	0.0622
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	9	789932	36452785	21595	0.0509
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	9	36453176	36457446	2	-2.5277
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	9	36461855	78843745	7017	0.0182
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	9	78843977	78844598	3	-1.4695
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	9	78852896	140938752	39065	0.028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	10	415240	3338089	1471	-0.3121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	10	3338141	75716731	41589	-0.0721
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	10	75718636	75719921	2	-1.108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	10	75720522	135225087	37328	-0.0425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	11	456120	103070887	56357	-0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	11	103071500	114399523	6867	-0.2833
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	11	114400527	134142530	13604	-0.025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	889902	12956710	6610	0.0929
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	12957926	12965365	2	-1.9199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	12966967	24796974	7319	-0.0204
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	24798946	24801632	4	-1.0896
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	24802324	30461451	3658	-0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	30464095	30472249	9	-0.9309
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	30473493	121641509	50785	-0.0221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	121641625	121643856	2	-3.5965
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	12	121644569	133161346	5176	-0.107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	19450806	19611203	103	0.1074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	19611248	19612262	2	-1.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	19612351	27839734	4448	0.2754
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	27840072	27840817	2	-1.2642
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	27843345	28462858	442	0.3094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	28468202	28474004	2	-1.9204
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	28476618	31108508	1892	0.3081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	31124651	33036882	1352	-0.1377
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	33042870	40415336	4964	0.3126
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	40417048	79202452	21026	-0.0547
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	79203105	79207644	4	-0.8524
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	79209835	81099898	1180	0.1205
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	81100512	87025573	3245	-0.2206
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	13	87029810	114987458	17634	0.293
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	14	20501368	105988038	49186	-0.0159
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	23687685	46196592	10854	-0.1463
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	46203118	46203583	4	-1.1743
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	46207523	82377093	22180	-0.0771
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	82377623	82473593	70	0.4868
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	82488680	82509611	9	0.0592
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	82512698	82606422	39	0.5242
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	82670169	90218947	4058	-0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	15	90250479	101884307	7064	0.3568
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	16	653459	13994947	7715	0.2304
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	16	13998457	14747102	387	-0.1862
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	16	18808403	83454672	29460	0.0864
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	16	83457012	83462605	6	-1.8819
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	16	83464335	89379936	3045	-0.1744
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	17	987221	21305392	9590	-0.2103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	17	25270517	27866061	1170	0.1154
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	17	27867315	27869311	2	-1.1731
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	17	27870084	49043348	9156	0.2075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	17	49043898	49047447	2	-0.544
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	17	49048064	80917016	16919	0.0391
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	329586	13988202	8042	0.1226
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	13992017	13992706	5	-0.922
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	13992794	27537019	5344	0.1151
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	27540548	65500625	23375	-0.1918
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	65501129	65503190	3	-1.7388
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	65506078	66649772	478	-0.1225
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	66651450	66651966	2	-1.5868
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	18	66653474	77109240	5121	-0.0713
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	19	284018	22688517	8183	-0.0907
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	19	22689336	22695657	8	-1.3235
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	19	22701461	33307307	4420	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	19	33307710	38753786	3004	-0.3043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	19	38756089	58878226	8253	-0.0285
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	20	455764	48145528	27790	0.098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	20	48239644	62219837	9344	0.5493
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	21	15347621	47678774	20479	-0.0136
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	22	17423930	49331012	16859	0.0481
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	X	3157107	94042982	35957	0.0193
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	X	94043319	94043583	2	-4.1356
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	X	94044104	98151360	1545	-0.2623
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	X	98151442	125293216	12937	-0.0229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	X	125294327	128162750	1161	-0.2711
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_B12_1230988	X	128168769	154905589	11655	0.0326
