Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	1	3218610	236899042	121678	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	1	236900018	236900537	7	-1.0932
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	1	236901818	247813706	6828	-0.0213
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	484222	166399106	87091	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	166399467	166401496	3	-2.0702
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	166401939	174423561	5101	0.0129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	174432758	191612248	9162	-0.6169
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	191612620	242476062	29316	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	2212571	59705135	33260	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	61026351	61048581	31	-0.6288
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	61048665	117871691	30989	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	117871884	117872602	4	-1.0958
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	117877410	197538677	41629	0.0121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	4	1053934	125459405	68745	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	4	125460351	125462935	3	-1.3129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	4	125463025	188763651	33484	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	914233	2080229	234	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	2081825	2089072	4	0.6537
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	2089369	74181209	38945	-0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	74183863	74186073	3	-1.1056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	74192125	76776381	1501	0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	76776692	76797925	11	0.5215
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	76803385	85986822	5086	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	85987251	137560712	28191	-0.6349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	137563983	178478398	25040	-0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	178483445	178484363	3	-1.2722
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	178487262	180360469	936	-0.068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	1014281	12725841	8352	-0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	12726566	12726569	2	-2.2475
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	12729265	15281714	1831	-0.0249
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	15283513	15283550	2	-1.9759
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	15288607	170903919	85848	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	705284	3546425	1050	-0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	3546653	3849481	102	-1.0383
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	4056433	79011396	38632	0.0107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	79020983	79023187	2	-1.4541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	79023377	158385118	41184	0.0181
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	8	617667	145232496	81205	0.404
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	9	789932	102912720	44435	-0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	9	102913946	102914269	2	-1.3402
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	9	102914361	140938752	23301	-0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	415240	19831958	13744	-0.0166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	19832047	19836215	2	-2.0406
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	19836837	63416560	22449	-0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	63421770	64160518	460	-0.5754
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	64160850	89418730	15139	-0.015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	89428994	90885272	1113	-0.569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	90889517	96275791	3117	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	96276850	97637808	748	-0.6072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	97648143	114320996	10209	-0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	114326015	114939738	389	-0.6479
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	114940247	118531856	2512	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	118537097	119285578	461	-0.6842
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	119297823	123938832	3528	-0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	123942782	124149352	172	-0.6439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	124149583	135225087	6457	-0.0223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	11	456120	45155353	28395	-0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	11	45155411	45190904	27	0.4269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	11	45196405	134142530	48493	-0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	889902	10142897	4985	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	10143498	10143603	2	-1.3962
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	10147604	44697372	17436	0.0223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	44700415	45827507	633	-0.6252
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	45828084	74241753	16328	0.0238
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	74245547	74246915	2	-1.4439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	74249288	75179421	474	0.0394
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	75185912	75186314	3	-1.0821
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	75187700	133161346	33768	0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	19450806	101189313	47316	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	101193310	101332716	64	-0.7188
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	101333859	101581000	178	-0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	101581061	101610654	47	0.4128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	101614644	114987458	8736	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	14	20501368	80199280	33722	0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	14	80206851	80207193	2	-1.4731
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	14	80209937	105988038	15503	-0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	23687685	72552311	27747	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	72552372	73314247	403	0.3246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	73314865	93645755	11507	-0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	93645826	94285235	34	0.2659
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	94285245	101884307	4660	-0.0118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	16	653459	78183744	33135	-0.0247
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	16	78186267	78283688	102	-0.6703
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	16	78284812	89379936	7420	-0.0198
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	17	987221	80917016	36880	-0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	18	329586	52240906	28786	-0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	18	52243246	52270145	14	0.5865
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	18	52270327	77109240	13646	-0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	19	284018	44849880	18174	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	19	44852134	44856791	2	-1.2691
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	19	44857059	58878226	5718	0.0349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	20	455764	15491394	9186	-0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	20	15493765	15702518	226	0.4478
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	20	15702907	62219837	27743	-0.0162
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	21	15347621	32323438	10693	-0.2461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	21	32324125	32324501	2	-2.1089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	21	32324969	47678774	9798	-0.2555
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	22	17423930	49331012	16880	-0.024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	X	3157107	38321561	15546	0.0132
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	X	38322020	38425551	87	0.2503
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	X	38435906	154905589	47848	7e-04
