Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	3218610	37448631	17960	-0.0241
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	37449595	37450243	2	-1.5102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	37450331	43545739	3367	-0.0184
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	43548257	43549428	5	-0.948
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	43550536	82766893	23777	-0.0176
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	82767070	83041505	172	0.3698
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	83049032	174154950	37594	-0.0092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	174155446	174362377	84	-0.6593
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	1	174367148	247813706	46077	-0.0127
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	2	484222	87057175	49834	-0.0153
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	2	87063379	87071351	4	-1.1508
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	2	87073942	237053065	78215	-0.0097
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	2	237053227	237053235	2	-2.4961
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	2	237053514	242476062	3142	-0.0157
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	2212571	19999795	10584	-0.0175
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	20003172	20003228	2	-2.1636
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	20006035	166332973	79651	-0.0156
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	166341050	166344335	2	-1.9194
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	166344970	179097797	6589	0.0042
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	179098396	179099755	2	-1.4299
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	3	179102388	197538677	9476	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	4	1053934	54591217	29249	-0.0224
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	4	54595044	54601351	6	-0.9683
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	4	54611444	188763651	73437	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	5	914233	58646112	31329	-0.0245
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	5	58646353	58647328	2	-1.24
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	5	58647909	180360469	69093	-0.0161
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	1014281	80447086	43735	-0.0098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	80449896	119567035	21864	-0.6565
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	119576206	119664866	68	-0.025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	119665072	121536607	1081	-0.6628
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	121540282	135927526	8948	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	135927720	135933569	3	-1.571
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	6	135934011	170903919	20667	-0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	705284	22735528	11321	0.0028
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	22735936	22736446	2	-1.3357
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	22738762	24035127	857	-0.0077
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	24039878	24040383	2	-1.4148
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	24040817	110682884	44091	-0.0168
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	110687160	110722124	19	-0.6516
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	7	110724433	158385118	24985	-0.0163
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	8	617667	137234475	77792	0.4264
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	8	137235512	137235645	2	-1.8732
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	8	137236949	139112158	1240	0.3914
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	8	139112201	139112236	2	-0.7107
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	8	139113885	145232496	2462	0.4035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	9	789932	9221800	5207	-0.0167
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	9	9222892	9631694	172	-0.68
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	9	9631801	140938752	62596	-0.0186
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	10	415240	135225087	80797	-0.0172
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	11	456120	62638911	34113	-0.0232
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	11	62639251	83116112	10229	0.4206
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	11	83119181	110409132	16414	-0.0181
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	11	110410449	110415517	2	-1.8986
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	11	110416666	134142530	16432	-0.0267
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	12	889902	17983252	9676	0.0508
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	12	17984481	17984675	2	1.5106
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	12	17985001	133161346	64208	0.0458
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	13	19450806	114987458	56612	-0.0157
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	14	20501368	105988038	49405	-0.0146
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	15	23687685	101884307	44486	-0.013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	653459	73366821	29943	-0.0296
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	73369060	73369186	3	0.9399
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	73370364	78647176	3786	-0.0315
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	78647972	78668315	12	-0.7118
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	78668994	82318045	2912	-0.0351
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	82318488	82323213	2	-1.5909
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	16	82323238	89379936	4092	-0.0277
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	17	987221	80917016	36949	-0.0148
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	18	329586	77109240	42631	-0.014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	19	284018	58878226	23924	-0.022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	20	455764	14691122	8972	-0.0241
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	20	15165524	15724399	486	-0.6662
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	20	15729314	38380263	11885	-0.0237
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	20	38380385	38380551	2	-1.6277
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	20	38382625	62219837	15891	-0.0333
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	21	15347621	35289246	12652	-0.0118
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	21	35290476	44491944	6659	-0.6673
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	21	44503173	47678774	1234	-0.01
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	22	17423930	49331012	16905	-0.0317
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	3157107	45783140	19152	0.0168
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	45786218	45788477	3	-1.0007
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	45794489	55111450	3413	-0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	55112424	55116016	3	0.9057
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	55122783	58317986	1252	-0.0185
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	62172719	62176166	2	-1.2727
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	62178060	95787446	12528	-0.0105
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	95793237	95909584	72	0.4729
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	95909865	123707738	13527	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	123709068	123709265	2	-1.5232
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	123709306	133705836	4421	0.003
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	133710632	133711353	2	-1.3254
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	133711434	146635942	6186	-0.0103
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	146643963	146644282	2	1.4223
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C04_1388116	X	146649475	154905589	3029	-0.0092
