Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	51598	75861	13	0.0125
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	76187	219482	10	0.564
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	219540	10464708	5278	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	10466423	10467633	5	-0.9521
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	10471449	16758722	3424	0.0078
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	16758780	16843043	40	0.2216
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	16878321	16885328	15	-0.0859
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	16885372	16984764	40	0.3359
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	16987014	25477645	5353	-2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	25483707	25518245	11	-0.7783
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	25518771	55016178	16161	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	55024040	55028064	2	-1.5093
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	55028171	61885690	5317	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	61886594	61890775	3	-3.2226
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	61892397	65626237	2772	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	65627443	65728313	66	0.5987
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	65729526	72522941	4452	1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	72528701	72535958	9	-1.0492
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	72541006	72583736	48	0.8475
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	72584492	81661044	5789	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	81661190	81661193	2	1.2179
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	81661255	86058525	3041	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86059101	86061670	2	-1.5556
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86063028	88028634	1306	-0.0083
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	88030442	88030586	2	-1.3562
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	88031838	103958840	9956	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	103958859	103965022	5	-0.9199
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	103965310	105820728	947	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	105820759	105823898	16	-2.2402
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	105825578	107186121	907	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	107186705	107187034	3	-0.9703
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	107189416	110036151	1771	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	110036555	110038470	3	-1.3106
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	110041045	112497610	1962	0.0144
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	112497716	112498913	23	0.5091
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	112507479	143553915	5249	0.0081
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	143560896	143560909	3	1.486
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	143576984	147159969	1121	0.0512
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	147173241	147557399	153	-0.6573
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	147558223	150804908	1497	-0.0054
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	150804982	150853164	58	0.2419
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	150853200	191422415	27360	0.0064
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	191422902	191422955	3	1.339
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	191422971	192714857	947	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	192718034	192721641	2	1.5651
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	192723639	194975846	1448	0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	194976069	195095561	113	0.3154
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	195097947	247191011	35946	0.0065
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	2784	1262589	841	0.0546
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	1268900	1273046	7	0.6825
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	1276622	4183562	2142	0.0174
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4191739	4196175	14	-2.2898
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4196278	4197212	6	-3.7962
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4197414	4201042	16	-1.8223
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4201387	13902161	7465	0.0096
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	13903675	13903755	2	-2.5535
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	13905324	41091739	18500	0.0092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	41091947	41099391	23	-0.6397
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	41104737	53086692	8620	0.0085
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	53088162	53144154	41	-1.0068
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	53155170	91630135	22753	0.0108
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	91637299	91651995	10	-0.6698
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	91669511	112160930	9271	0.0089
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	112163415	112163837	2	-1.4742
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	112167858	118119115	3559	0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	118121280	118121322	2	-1.2808
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	118132485	119357232	865	0.0081
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	119359419	119359690	2	-1.3613
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	119360075	127568491	5233	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	127573516	127574233	2	1.6246
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	127574416	146578555	11531	0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	146580874	146583404	24	0.8983
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	146594276	242738129	59172	0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	35345	1756803	1554	0.0158
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	1757524	1764158	7	-1.1105
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	1764200	2022129	240	-0.0076
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	2022417	2023351	3	-1.5928
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	2025726	61101861	40156	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	61102245	61103057	3	-1.084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	61105940	65163493	3433	0.0068
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65164275	65185492	53	-0.6506
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65191389	65822120	531	-0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65822663	65822906	2	-1.5878
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65823584	68828854	1890	-0.0058
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	68828949	68830103	14	-1.5256
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	68831448	99880198	15664	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	99889994	99890004	2	-1.4904
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	99890076	100427453	306	0.0312
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	100427524	100431846	23	0.345
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	100431968	131246388	18759	0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	131249276	131289614	52	0.4791
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	131289688	150445666	11923	0.0095
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	150446085	150450811	25	-0.9514
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	150453770	163606060	8070	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	163620294	163625399	14	-0.9599
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	163626942	163996153	266	0.0335
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	163997321	164108689	65	0.757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	164109266	194360656	19202	0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	194360739	194361700	5	1.3807
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	194363167	196192286	1241	0.0111
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	196192336	196192769	2	-1.2637
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	196196720	196875861	256	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	196884256	196960434	45	-0.6681
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	196964365	199380515	1172	0.0207
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	2281	9055941	5248	0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9058399	9088443	13	-0.7003
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9095185	9832514	547	-0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9832726	9840596	27	2.2629
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9843312	9844366	7	0.7094
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9845240	10001452	171	0.039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10002252	10009766	15	-0.7221
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10011816	19872156	7235	0.0028
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	19872469	19872529	2	-1.6237
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	19875400	21654477	1335	0.0115
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	21657735	21679799	23	-1.1352
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	21683644	69057755	27761	-0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	69057943	69187710	64	-0.3377
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	69188929	70155852	329	0.0448
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	70158099	70263213	51	0.3217
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	70263245	73770727	1974	0.01
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	73771108	73774302	2	-3.8518
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	73777679	156021998	49546	0.0058
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	156022455	156022528	3	-3.3295
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	156022649	157187630	842	0.0175
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	157187733	157187748	2	-1.2814
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	157187923	157462646	189	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	157465712	157466330	2	1.4392
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	157466549	162091333	2876	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	162093056	162104369	32	0.325
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	162104408	172605921	6677	0.0062
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172611459	172614299	11	-1.1831
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172614351	172879730	164	-0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172883310	172890754	3	-1.0235
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172891529	173224503	231	-0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	173225723	173226108	12	-1.6483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	173232554	191261904	12132	0.017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	68532	12872313	10226	0.0108
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	12872375	12891533	11	-1.6435
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	12902201	45975056	20520	0.0094
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	45975431	46401198	80	-0.2693
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	46413084	65903674	10426	0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	65905346	65905701	3	-1.1189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	65906229	81454519	8889	0.0037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	81455034	81463238	3	-3.109
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	81463794	103879120	12653	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	103888272	103888503	4	-2.0264
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	103888948	174367659	46882	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	174368627	174371834	8	-1.2876
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	174371849	180722926	3452	0.0075
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	94661	239837	124	0.0222
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	247306	325821	76	-0.3673
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	326149	5971210	4662	0.0126
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	5978930	5979435	3	-3.4918
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	5982044	18447912	9351	0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	18447985	18448277	3	1.0771
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	18450113	29945167	7534	0.0129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29945293	29945437	2	2.3045
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29945456	29958359	16	0.4428
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29979615	30004400	10	-1.1038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	30004638	30026566	22	-0.259
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	30029053	30029106	2	-1.6414
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	30029202	32562253	1156	0.0145
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	32562501	32605094	13	-0.729
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	32605184	32681749	19	0.3847
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	32681992	54039110	13782	0.0032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	54039189	54039814	6	-1.791
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	54043307	67097634	5498	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67098172	67099913	6	0.9637
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67099956	67737263	526	0.0087
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67737350	67741252	13	-0.5624
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67744804	74648586	4484	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	74648953	74651291	5	-0.9961
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	74651462	81334706	4320	0.0142
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	81340908	81346253	33	-0.8429
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	81351060	95532912	9110	-0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	95534097	95616875	68	-1.0395
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	95623707	115431200	12207	0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	115432381	115432882	3	-1.4058
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	115446895	170892930	36950	0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	52911	19561649	13955	0.0129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	19568377	19568524	2	-1.5499
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	19571109	22401305	2149	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	22401997	22403012	2	-2.5689
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	22405279	54353999	22477	0.0095
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	54354003	54354008	4	3.9162
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	54354011	57954446	2077	0.0219
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	57954873	57978666	3	-1.0253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	57990533	61495380	57	0.0374
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	61495436	61624773	13	-0.5168
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	61651760	61718176	25	-0.033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	61740813	61761182	16	-0.6833
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	61761509	109221034	26615	0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109224328	109225008	15	-0.932
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109225010	109228480	10	-0.3445
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109228865	109241146	10	-2.6098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109241218	125832210	10043	0.0049
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	125832718	125833851	12	-1.444
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	125834112	152569310	16755	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	152576081	153157221	455	0.632
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	153159805	154020828	589	0.0116
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	154024104	154030546	4	-2.5086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	154031763	154929222	777	0.0148
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	154929851	154931782	2	-1.3033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	154931983	156078435	832	0.0098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	156084551	156086820	3	-2.5511
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	156086940	158819765	1631	0.0159
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	21254	583041	327	0.029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	584944	585908	10	0.9106
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	591043	2117640	1236	0.0102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2117786	2167373	43	-0.9837
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2172371	2310084	147	0.0587
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2310208	2570079	214	0.6274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2570605	5581675	4117	0.03
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	5586134	5591903	27	-0.707
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	5594496	6813152	1597	0.0104
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	6813262	6825343	15	-0.5183
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	6827115	6847072	5	0.6955
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	6863552	8055448	331	-0.0207
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	8091754	8109713	4	1.0487
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	8124554	11932654	3225	0.0066
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	11972069	12038532	8	-0.7267
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	12071716	14622033	2159	0.0071
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	14622037	14622041	2	-1.2762
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	14622777	21154407	5829	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	21156379	21158338	4	-0.8517
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	21162504	25028104	2550	0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	25030360	25040250	27	0.8614
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	25047021	43723643	11651	-0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	43741049	43782832	13	-0.7053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	43783352	47487019	139	-0.0291
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	47501966	47555098	19	-0.6942
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	47555500	146268959	62279	0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	36587	5069156	5251	0.0185
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	5071416	5071766	8	-0.8639
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	5071852	6645056	1096	0.0298
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	6647192	6651406	2	1.6375
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	6651613	9952498	3201	0.0176
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	9952603	9957114	11	-0.5198
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	9957241	23351805	10894	0.0074
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	23353115	23363484	8	-2.5477
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	23368488	28299878	3783	0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	28300570	28301629	2	1.5437
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	28302061	29938782	1171	-0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	29938842	29951076	20	-0.4404
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	29952346	30242858	202	-0.0178
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30245385	30311560	37	0.5274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30311952	30319054	8	0.1856
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30319075	30382093	47	0.6155
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30386359	41942516	5621	0.0034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	41962506	41975187	3	-1.3713
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	42013107	43712046	61	0.4644
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	43716914	67673801	243	0.0827
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	67675871	67678367	8	1.7512
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	67699736	68073769	51	-0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	68076556	69232108	143	0.2992
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	69232330	140211215	48069	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	62809	6471526	5454	0.0201
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	6474616	6491129	17	0.5985
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	6493313	27263909	15781	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	27265910	27268479	13	0.6337
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	27269999	66976282	23493	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	66977929	66984436	27	-1.8874
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	66984452	70445975	2215	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	70447719	70448492	3	-1.1129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	70451497	82868139	7929	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	82871310	82879763	10	-0.9866
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	82884449	90928653	5710	-0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90932947	90940074	13	-1.0289
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90940386	90962918	40	-0.0674
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90965097	90965187	2	-1.4254
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90965629	135356694	30409	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	188510	243662	37	0.1189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	243841	244010	2	1.8027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	244064	4926819	2440	0.0094
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	4926853	4932848	28	-2.1125
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	4932910	5740499	796	0.0088
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	5743981	5765715	33	-0.5446
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	5765914	18905648	9430	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	18905685	18916691	35	-0.3881
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	18917326	37089996	13487	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	37090049	37090734	7	0.7118
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	37090747	42915687	3870	0.0066
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	42918407	42926704	3	0.9856
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	42926860	48554998	3288	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48558010	48559252	2	1.1522
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48562894	48666319	42	0.0191
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48667000	48670651	6	-0.8719
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48678332	48740294	26	-0.0349
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48747676	48849766	21	-0.6199
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48849795	49664951	348	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	49667437	49714247	19	-0.8554
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	49714343	50256797	293	0.0284
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50258820	50301966	6	-0.7127
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50313632	50358432	19	0.1046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50359444	50983318	59	-0.379
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50983680	51051627	10	-1.9529
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	51061717	54477399	139	-0.0251
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	54514867	54596906	11	-0.8037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	54598093	55130764	228	-0.0273
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	55130779	55210152	57	0.4566
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	55217259	101099594	28661	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	101103070	101103174	4	-1.1908
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	101103422	127332323	18258	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	127332890	127332937	2	-1.5274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	127336902	134449982	5514	0.0178
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	20703	739577	422	0.0513
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	739610	744290	13	-0.9081
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	745615	4255865	2449	0.0167
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	4256054	4256311	3	1.3311
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	4256494	27539247	15793	0.0075
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	27539318	27542629	24	-0.9201
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	27548428	31890972	3222	0.0101
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	31893563	31959169	61	0.6102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	31959282	33185927	892	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	33192673	33198345	26	-0.7022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	33198641	36273993	847	0.0317
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	36298834	36320625	3	-1.8665
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	36339406	36578346	55	-0.0911
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	36604027	36604070	2	-1.4437
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	36626493	47011309	6445	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	47011506	47011682	3	-2.218
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	47016303	132288262	54835	0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	17924949	22527177	2896	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	22527187	22531515	14	-0.7315
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	22536195	51974706	20593	0.0064
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	51977345	52003786	7	-1.1102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	52015880	57482791	3082	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	57488282	57495031	6	-0.9024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	57500053	64249190	4065	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	64250132	64251496	3	-3.0773
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	64254284	71374989	4511	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	71375556	71377548	2	-3.8072
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	71378450	114126499	29158	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	18072124	18916877	64	-0.0566
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	18919591	19107146	10	-0.6505
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	19170042	23548734	2870	0.0268
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	23549227	23558848	11	-0.5801
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	23558852	39678679	10157	0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	39683673	39686670	2	-2.6794
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	39687916	39782339	69	-0.0597
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	39782603	39782687	2	-1.3864
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	39784957	73070876	21160	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	73076460	73090732	8	0.8554
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	73099653	104185430	20407	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	104188855	104193239	2	-1.2316
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	104194445	105531947	383	0.0301
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	105550720	105550986	2	-2.2085
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	105553173	105848388	139	0.0559
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	105854089	105873098	8	0.9013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	105886988	106231370	219	0.0858
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	106231444	106245617	12	-0.4905
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	106247258	106356482	77	0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	18276341	80692083	38042	0.0067
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	80692417	80966626	13	-0.8514
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	80981569	100286563	14018	0.0097
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	777	14803698	11122	0.0102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	14805302	15023758	78	-0.6083
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	15032942	19851864	2330	0.0172
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	19853151	19873376	28	-0.8843
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	19874863	21422589	907	-0.011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	21428039	21500956	21	-0.3556
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	21501135	22338871	363	0.0208
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	22349475	22618243	75	-0.3132
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	22620480	32496123	5240	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	32496402	32496407	4	-1.0473
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	32496410	35041294	679	0.0283
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	35063218	35081162	3	-1.3891
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	35140727	54352715	6477	-0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	54353890	54379945	22	-0.6457
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	54387058	88815036	25170	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	526	36675234	20974	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	36676540	36684057	24	1.3753
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	36686250	41569489	2548	-0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	41569943	42143377	141	0.3212
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	42144468	78643088	21609	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	1543	2013813	1439	0.0369
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	2017953	2019280	5	0.9875
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	2019594	7738661	4137	0.0057
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	7742784	7745226	2	1.4401
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	7745352	38305676	18500	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	38310567	38311765	25	-0.6847
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	38312393	76116029	26728	0.0076
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	41910	12553001	5072	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	12558366	12559102	2	-1.5706
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	12561523	14899939	1055	-0.0079
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	14906192	14910299	3	-1.434
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	14912287	32651846	5147	0.011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	32657355	32733670	15	-0.4425
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	32760841	40541162	5526	0.0066
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	40541333	40553688	22	-0.5092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	40558584	41537715	443	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	41537990	41539338	10	-0.5776
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	41539477	56823625	7661	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	56834164	56840009	11	-2.637
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	56846717	63789666	4386	0.0117
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	9305	1500503	1186	0.0229
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1505190	1508562	16	-0.8598
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1508787	1508999	5	-0.0413
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1509580	1541893	41	1.36
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1545946	52078275	33749	0.0032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	52081215	52092058	38	-0.7241
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	52095981	53571775	1232	-0.0061
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	53571835	53571849	2	-1.6483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	53572113	62426597	6225	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	9758742	19364525	4058	0.0127
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	19370157	19370187	2	-2.5818
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	19370336	46921385	20351	0.0069
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	14432528	15037301	94	-0.0236
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	15042742	15534001	89	0.5741
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	15540092	49581321	23388	0.0086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	108477	2676353	95	0.775
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	2713391	76266264	39857	-0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	76270041	76295047	2	2.2394
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	76295049	76461534	16	0.5496
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	76462887	92197684	8116	0.0148
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	92209788	92224260	40	0.6412
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	92231328	103913153	6456	-0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	103915250	103915410	3	-1.8396
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	103917508	148451627	26331	-0.0052
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148452463	148462405	9	-2.073
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148493841	148647635	83	0.0874
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148683404	148789418	67	1.032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148850985	154582502	3169	-0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	154582692	154835548	19	0.8475
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	2712734	3045595	142	1.3924
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	3065268	6161425	653	0.8955
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	6167901	7459842	518	1.5787
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	7460746	7478121	8	4.8343
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	7478484	10505861	1167	1.8284
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	10506141	13256200	475	1.208
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	13257851	13302392	28	1.7483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	13302918	13315400	8	5.0343
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	13319281	16734959	1649	1.6442
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	16735284	18084284	629	1.8809
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	18085938	18143853	34	3.3363
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	18145777	18433955	121	1.8253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	18434631	19471359	455	2.4887
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	19483385	22062735	946	1.777
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	22063159	22099738	3	7.4524
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	22125089	22273597	75	1.4038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	22274006	24639899	476	2.3749
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	24648044	25040759	84	1.1135
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	25040867	25412124	59	3.7962
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	25431775	25474682	11	2.7682
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	25474686	26129939	97	0.9841
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	26130472	26704289	183	2.5745
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	26708392	26731407	7	6.7714
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	26731471	26861404	48	2.4344
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	26866725	57427647	169	1.3835
