Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	61735	85998	13	0.0125
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86324	229619	10	0.564
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	229677	10542121	5278	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	10543836	10545046	5	-0.9521
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	10548862	16886135	3424	0.0078
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	16886193	16970456	40	0.2216
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	17005734	17012741	15	-0.0859
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	17012785	17112177	40	0.3359
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	17114427	25605058	5351	-2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	25611120	25645658	11	-0.7783
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	25646184	55243590	16159	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	55251452	55255476	2	-1.5093
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	55255583	62113102	5317	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	62114006	62118187	3	-3.2226
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	62119809	65853649	2772	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	65854855	65955725	66	0.5987
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	65956938	72750353	4534	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	72756113	72763370	9	-1.0492
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	72768418	72811148	48	0.8475
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	72811904	81888456	5788	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	81888602	81888605	2	1.2179
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	81888667	86285937	3036	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86286513	86289082	2	-1.5556
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86290440	88256046	1306	-0.0083
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	88257854	88257998	2	-1.3562
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	88259250	104157317	9953	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	104157336	104163499	5	-0.9199
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	104163787	106019205	947	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	106019236	106022375	16	-2.2402
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	106024055	107384598	907	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	107385182	107385511	3	-0.9703
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	107387893	110234628	1771	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	110235032	110236947	3	-1.3106
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	110239522	112696087	1962	0.0144
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	112696193	112697390	23	0.5091
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	112705956	144842558	5245	0.0082
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	144849539	144849552	3	1.486
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	144865627	148893345	1121	0.0513
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	148906617	149290775	153	-0.6573
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	149291599	152538284	1498	-0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	152538358	152586540	58	0.2419
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	152586576	193155792	27359	0.0064
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	193156279	193156332	3	1.339
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	193156348	194448234	947	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	194451411	194455018	2	1.5651
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	194457016	196709223	1448	0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	196709446	196828938	113	0.3154
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	196831324	249224388	35944	0.0065
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	12784	1283582	841	0.0546
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	1289893	1294039	7	0.6825
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	1297615	4205687	2142	0.0174
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4213864	4218300	14	-2.2898
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4218403	4219337	6	-3.7962
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4219539	4223167	16	-1.8223
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	4223512	13984710	7463	0.0095
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	13986224	13986304	2	-2.5535
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	13987873	41238235	18500	0.0092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	41238443	41245887	23	-0.6397
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	41251233	53233188	8618	0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	53234658	53290650	41	-1.0068
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	53301666	92266408	22746	0.0109
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	92273572	92288268	10	-0.6698
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	92305784	112444459	9274	0.0089
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	112446944	112447366	2	-1.4742
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	112451387	118402645	3555	0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	118404810	118404852	2	-1.2808
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	118416015	119640762	866	0.0075
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	119642949	119643220	2	-1.3613
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	119643605	127852021	5231	0.0061
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	127857046	127857763	2	1.6246
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	127857946	146862085	11529	0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	146864404	146866934	24	0.8983
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	146877806	243089456	59175	0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	60345	1781803	1553	0.0154
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	1782524	1789158	7	-1.1105
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	1789200	2047129	240	-0.0076
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	2047417	2048351	3	-1.5928
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	2050726	61126821	40157	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	61127205	61128017	3	-1.084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	61130900	65188453	3433	0.0068
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65189235	65210452	53	-0.6506
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65216349	65847080	531	-0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65847623	65847866	2	-1.5878
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	65848544	68746164	1890	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	68746259	68747413	14	-1.5256
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	68748758	98397508	15658	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	98407304	98407314	2	-1.4904
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	98407386	98944763	306	0.0312
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	98944834	98949156	23	0.345
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	98949278	129763698	18759	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	129766586	129806924	52	0.4791
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	129806998	148962976	11923	0.0095
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	148963395	148968121	25	-0.9514
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	148971080	162123366	8069	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	162137600	162142705	14	-0.9599
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	162144248	162513459	266	0.0335
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	162514627	162625995	65	0.757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	162626572	192877962	19203	0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	192878045	192879006	5	1.3807
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	192880473	194710997	1241	0.0111
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	194711047	194711480	2	-1.2637
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	194715431	195390680	256	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	195399075	195474763	45	-0.6681
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	195478694	197896118	1172	0.0207
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	12281	9446843	5248	0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9449301	9479345	13	-0.7003
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	9486087	10223416	547	-0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10223628	10231498	27	2.2629
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10234214	10235268	7	0.7094
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10236142	10392354	171	0.039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10393154	10400668	15	-0.7221
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	10402718	20263058	7235	0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	20263371	20263431	2	-1.6237
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	20266302	22045379	1336	0.0115
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	22048637	22070701	23	-1.1352
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	22074546	69375160	27763	-0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	69375348	69505115	64	-0.3377
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	69506334	70121263	325	0.0324
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	70123510	70228624	51	0.3217
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	70228656	73551863	1974	0.01
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	73552244	73555438	2	-3.8518
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	73558815	155802548	49554	0.0058
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	155803005	155803078	3	-3.3295
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	155803199	156968180	842	0.0175
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	156968283	156968298	2	-1.2814
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	156968473	157243196	189	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	157246262	157246880	2	1.4392
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	157247099	161871883	2875	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	161873606	161884919	32	0.325
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	161884958	172369346	6678	0.0062
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172374884	172377724	11	-1.1831
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172377776	172643155	164	-0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172646735	172654179	3	-1.0235
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172654954	172987928	231	-0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172989148	172989533	12	-1.6483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	172995979	191027923	12131	0.017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	15532	12819313	10228	0.0108
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	12819375	12838533	11	-1.6435
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	12849201	45939299	20517	0.0093
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	45939674	46365441	80	-0.2693
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	46377327	65867918	10425	0.003
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	65869590	65869945	3	-1.1189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	65870473	81418763	8891	0.0037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	81419278	81427482	3	-3.109
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	81428038	103851221	12653	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	103860373	103860604	4	-2.0264
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	103861049	174435053	46883	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	174436021	174439228	8	-1.2876
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	174439243	180790320	3452	0.0075
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	149661	294837	124	0.0222
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	302306	380821	76	-0.3673
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	381149	6026211	4662	0.0126
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	6033931	6034436	3	-3.4918
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	6037045	18339933	9350	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	18340006	18340298	3	1.0771
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	18342134	29837188	7534	0.0129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29837314	29837458	2	2.3045
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29837477	29850380	16	0.4428
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29871636	29896421	10	-1.1038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29896659	29918587	22	-0.259
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29921074	29921127	2	-1.6414
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	29921223	32454275	1156	0.0145
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	32454523	32497116	13	-0.729
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	32497206	32573771	19	0.3847
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	32574014	53931151	13783	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	53931230	53931855	6	-1.791
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	53935348	67040913	5499	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67041451	67043192	6	0.9637
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67043235	67680542	526	0.0087
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67680629	67684531	13	-0.5624
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	67688083	74591858	4483	1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	74592225	74594563	5	-0.9961
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	74594734	81277987	4320	0.0142
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	81284189	81289534	33	-0.8429
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	81294341	95476191	9109	-0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	95477376	95560154	68	-1.0395
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	95566986	115324507	12207	0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	115325688	115326189	3	-1.4058
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	115340202	171051005	36957	0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	43355	19595124	13955	0.013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	19601852	19601999	2	-1.5499
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	19604584	22434780	2149	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	22435472	22436487	2	-2.5689
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	22438754	54386505	22473	0.0095
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	54386509	54386514	4	3.9162
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	54386517	57950504	2076	0.022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	57950931	57974724	3	-1.0253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	57986591	61857945	57	0.0374
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	61858001	61991084	13	-0.5169
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	62014325	62080741	25	-0.033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	62103378	62123747	16	-0.6833
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	62124074	109433798	26622	0.0052
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109437092	109437772	15	-0.932
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109437774	109441244	10	-0.3445
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109441629	109453910	10	-2.6098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	109453982	126044974	10044	0.0049
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	126045482	126046615	12	-1.444
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	126046876	152938377	16753	0.0037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	152945148	153526288	455	0.632
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	153528872	154389895	591	0.012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	154393171	154399613	4	-2.5086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	154400830	155236461	777	0.0148
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	155237090	155239021	2	-1.3033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	155239222	156385674	832	0.0098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	156391790	156394059	3	-2.5511
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	156394179	159127004	1631	0.0159
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	31254	593041	327	0.029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	594944	595908	10	0.9106
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	601043	2130233	1237	0.0098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2130379	2179966	43	-0.9837
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2184964	2322677	147	0.0587
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2322801	2582672	214	0.6274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	2583198	5594267	4117	0.03
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	5598726	5604495	27	-0.707
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	5607088	6825742	1597	0.0104
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	6825852	6837933	15	-0.5183
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	6839705	6859662	5	0.6955
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	6876142	8018038	331	-0.0207
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	8054344	8072303	4	1.0487
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	8087144	11895245	3223	0.0068
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	11934660	12001123	8	-0.7267
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	12034307	14577662	2160	0.0073
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	14577666	14577670	2	-1.2762
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	14578406	21110127	5829	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	21112099	21114058	4	-0.8517
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	21118224	24972187	2550	0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	24974443	24984333	27	0.8614
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	24991104	43604486	11652	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	43621892	43663675	13	-0.7053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	43664195	47367854	139	-0.0291
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	47382801	47435933	19	-0.6942
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	47436335	146298155	62285	0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	46587	5079156	5253	0.0185
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	5081416	5081766	8	-0.8639
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	5081852	6655056	1096	0.0298
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	6657192	6661406	2	1.6375
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	6661613	9962498	3201	0.0176
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	9962603	9967114	11	-0.5198
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	9967241	23361805	10895	0.0074
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	23363115	23373484	8	-2.5476
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	23378488	28309878	3783	0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	28310570	28311629	2	1.5437
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	28312061	29948782	1171	-0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	29948842	29961076	20	-0.4404
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	29962346	30252858	202	-0.0178
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30255385	30321560	37	0.5274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30321952	30329054	8	0.1856
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30329075	30392093	47	0.6155
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30396359	41952516	5626	0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	41972506	41985187	3	-1.3713
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	42023107	43772050	61	0.4644
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	43776918	68183981	244	0.082
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	68186051	68188547	8	1.7512
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	68209916	68683949	51	-0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	68686736	69942288	143	0.2992
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	69942510	141091394	48075	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	72809	6431520	5454	0.0201
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	6434610	6451123	17	0.5985
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	6453307	27223903	15780	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	27225904	27228473	13	0.6337
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	27229993	67306276	23493	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	67307923	67314430	27	-1.8874
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	67314446	70775969	2215	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	70777713	70778486	3	-1.1129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	70781491	82878159	7923	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	82881330	82889783	10	-0.9866
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	82894469	90938673	5716	-0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90942967	90950094	13	-1.0289
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90950406	90972938	40	-0.0674
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90975117	90975207	2	-1.4254
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	90975649	135506704	30407	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	198510	253662	37	0.1189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	253841	254010	2	1.8027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	254064	4970243	2439	0.0091
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	4970277	4976272	28	-2.1125
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	4976334	5783923	796	0.0088
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	5787405	5809139	33	-0.5446
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	5809338	18949072	9430	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	18949109	18960115	35	-0.3881
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	18960750	37133420	13485	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	37133473	37134158	7	0.7118
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	37134171	42959111	3869	0.0065
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	42961831	42970128	3	0.9856
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	42970284	48598422	3288	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48601434	48602676	2	1.1522
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48606318	48709743	42	0.0191
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48710424	48714075	6	-0.8719
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48721756	48783718	26	-0.0349
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48791100	48893190	21	-0.6199
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	48893219	49708375	348	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	49710861	49757671	19	-0.8554
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	49757767	50300221	293	0.0284
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50302244	50345390	6	-0.7127
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50357056	50401856	19	0.1046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	50402868	51126742	59	-0.379
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	51127104	51195051	10	-1.9529
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	51205141	54720823	139	-0.0251
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	54758291	54840330	11	-0.8037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	54841517	55374188	228	-0.0273
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	55374203	55453576	57	0.4566
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	55460683	101594384	28658	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	101597860	101597964	4	-1.1908
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	101598212	127827113	18255	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	127827680	127827727	2	-1.5274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	127831692	134944770	5513	0.0176
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	150442	869316	422	0.0513
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	869349	874029	13	-0.9081
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	875354	4385604	2449	0.0167
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	4385793	4386050	3	1.3311
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	4386233	27647980	15790	0.0074
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	27648051	27651362	24	-0.9201
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	27657161	31999705	3221	0.0101
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	32002296	32067902	61	0.6102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	32068015	33294660	892	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	33301406	33307078	26	-0.7021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	33307374	37987726	847	0.0317
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	38012567	38034358	3	-1.8665
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	38053139	38292079	55	-0.0911
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	38317760	38317803	2	-1.4437
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	38340226	48725042	6444	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	48725239	48725415	3	-2.218
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	48730036	133778189	54832	0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	19026949	23629177	2896	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	23629187	23633515	14	-0.7315
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	23638195	53076705	20591	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	53079344	53105785	7	-1.1102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	53117879	58584790	3082	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	58590281	58597030	6	-0.9024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	58602052	65351189	4064	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	65352131	65353495	3	-3.0773
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	65356283	72476988	4511	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	72477555	72479547	2	-3.8072
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	72480449	115108397	29157	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	19002124	19846877	64	-0.0566
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	19849591	20037146	10	-0.6505
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	20100326	24478894	2870	0.0268
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	24479387	24489008	11	-0.5801
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	24489012	40608928	10155	0.0049
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	40613922	40616919	2	-2.6794
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	40618165	40712589	69	-0.0597
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	40712853	40712937	2	-1.3864
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	40715207	74001123	21158	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	74006707	74020979	8	0.8554
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	74029900	105114385	20408	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	105117810	105122194	2	-1.2316
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	105123400	106460902	383	0.0301
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	106479675	106479941	2	-2.2085
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	106482128	106777343	139	0.0559
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	106783044	106802053	8	0.9013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	106815943	107160325	219	0.0858
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	107160399	107174572	12	-0.4905
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	107176213	107285437	77	0.0047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	20016328	82895028	38040	0.0067
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	82895362	83169571	13	-0.8514
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	83184514	102469040	14017	0.0096
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	60777	14896197	11121	0.0101
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	14897801	15116257	78	-0.6083
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	15125441	19944363	2330	0.0172
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	19945650	19965875	28	-0.8843
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	19967362	21515088	907	-0.011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	21520538	21593455	21	-0.3556
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	21593634	22431370	363	0.0208
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	22441974	22710742	75	-0.3132
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	22712979	32588622	5239	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	32588901	32588906	4	-1.0473
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	32588909	35183793	679	0.0283
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	35205717	35223661	3	-1.3891
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	35283226	55795214	6477	-0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	55796389	55822444	22	-0.6457
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	55829557	90287535	25091	0.0046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	526	39421708	20973	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	39423014	39430531	24	1.3753
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	39432724	44213712	2548	-0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	44214166	44788194	141	0.3212
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	44789285	81049726	21610	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	11543	2023813	1440	0.0368
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	2027953	2029280	5	0.9875
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	2029594	7748661	4138	0.0057
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	7752784	7755226	2	1.4401
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	7755352	40051678	18497	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	40056569	40057767	25	-0.6847
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	40058395	78015057	26726	0.0076
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	90910	12692001	5072	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	12697366	12698102	2	-1.5706
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	12700523	15038939	1055	-0.0079
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	15045192	15049299	3	-1.434
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	15051287	27960006	5146	0.0109
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	27965515	28041830	15	-0.4425
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	28069001	35849322	5526	0.0066
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	35849493	35861848	22	-0.5092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	35866744	36845875	442	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	36846150	36847498	10	-0.5776
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	36847637	52131813	7662	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	52142352	52148197	11	-2.637
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	52154905	59097854	4386	0.012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	61305	1552503	1186	0.0229
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1557190	1560562	16	-0.8598
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1560787	1560999	5	-0.0413
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1561580	1593893	41	1.36
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	1597946	26018291	18705	0.0073
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	26057295	26069758	3	-1.1576
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	26072582	52644868	15044	-0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	52647808	52658651	38	-0.7241
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	52662574	54138368	1232	-0.0061
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	54138428	54138442	2	-1.6483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	54138706	62956153	6225	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	10736871	20442654	4058	0.0127
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	20448286	20448316	2	-2.5818
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	20448465	48096957	20350	0.0069
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	16052528	16657301	94	-0.0236
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	16662742	17154001	89	0.5741
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	17160092	51234455	23388	0.0086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	168477	2666353	95	0.775
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	2703391	76349873	39867	-0.0051
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	76353650	76378656	2	2.2394
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	76378658	76545159	16	0.5496
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	76546512	82264785	2780	-0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	82264821	82265458	2	1.7851
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	82267238	92311028	5302	0.031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	92323132	92337030	39	0.6488
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	92337604	104026497	6462	-0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	104028594	104028754	3	-1.8396
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	104030852	148643710	26334	-0.0048
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148644546	148654489	9	-2.073
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148686062	148839824	83	0.0874
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	148875597	149028760	67	1.032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	149100327	154929308	3170	-0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	154929498	155182354	19	0.8475
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	2652734	2841968	90	1.4189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	2846062	6101425	738	0.824
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	6107901	7399842	524	1.5395
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	7400746	7418121	8	4.8343
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	7418484	9895861	1168	1.8232
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	9896141	14746806	475	1.208
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	14748457	14792998	28	1.7483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	14793524	14806006	8	5.0343
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	14809887	18225565	1652	1.6403
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	18225890	19574890	630	1.8798
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	19576544	19634459	34	3.3363
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	19636383	19924561	121	1.8253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	19925237	21011971	455	2.4887
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	21023997	23653347	947	1.7757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	23653771	23690350	3	7.4524
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	23715701	23864209	75	1.4038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	23864618	26230511	476	2.3749
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	26238656	26631371	84	1.1135
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	26631479	27002736	59	3.7962
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	27022387	27065294	11	2.7682
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	27065298	27720551	97	0.9841
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	27721084	28294901	183	2.5745
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	28299004	28322019	7	6.7714
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	28322083	28452016	48	2.4344
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	Y	28457337	59018259	169	1.3835
