Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	3218610	86285937	47445	-3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86286513	86289082	2	-1.5556
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	1	86290440	247813706	81660	0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	484222	53233188	31154	0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	53234658	53290650	34	-1.0228
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	53301666	119640762	31077	0.0054
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	119642949	119643220	2	-1.3613
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	2	119643605	242476062	69007	0.0032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	2212571	98397508	53295	0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	98407304	98407314	2	-1.4904
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	3	98407386	197538677	53062	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	4	1053934	188763651	102734	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	5	914233	180360469	100488	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	6	1014281	170903919	96483	0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	7	705284	158385118	81310	0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	8	617667	145232496	81516	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	789932	30252858	18193	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30255385	30392093	75	0.5677
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	9	30396359	140938752	49748	-0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	415240	6431520	3937	0.0086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	6434610	6451123	17	0.5985
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	6453307	19500137	9630	0.0028
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	19500152	19501125	2	-1.356
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	19501166	53199474	16446	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	53199619	53200276	2	-1.3316
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	10	53201249	135225087	50820	-0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	456120	127827113	73071	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	127827680	127827727	2	-1.5274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	11	127831692	134142530	4165	0.0067
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	12	889902	133161346	73924	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	13	19450806	114987458	56643	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	20501368	40712589	10915	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	40712853	40712937	2	-1.3864
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	14	40715207	105988038	38516	-2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	15	23687685	101884307	44518	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	16	653459	89379936	40788	-0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	987221	62904579	27631	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	62925717	62926038	2	1.3324
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	17	62926689	80917016	9339	-0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	18	329586	77109240	42657	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	19	284018	58878226	23941	-0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	455764	54138368	31872	-0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	54138428	54138442	2	-1.6483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	20	54138706	62219837	5393	-0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	21	15347621	47678774	20576	1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	22	17423930	49331012	16926	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	3157107	12558267	3230	-0.0128
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	12561500	12562897	2	-1.7225
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	12563708	24447214	5758	-0.0093
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	24450686	24450819	2	-1.6159
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	24451661	82264785	22380	0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	82264821	82265458	2	1.7851
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	82267238	104026497	8980	0.0069
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	104028594	104028754	3	-1.8396
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C09_1387998	X	104030852	154905589	23158	6e-04
