Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	1	3218610	247813706	129110	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	2	484222	10000205	5730	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	2	10003193	10005308	2	-1.4034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	2	10007731	123046053	58538	0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	2	123049839	123057379	9	-0.9939
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	2	123059707	242476062	66995	0.0041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	3	2212571	197538677	106362	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	1053934	21059144	12287	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	21060091	21073186	9	-0.7053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	21078006	29316074	5383	-0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	29318239	29318249	2	-2.1757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	29318265	66567056	18553	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	66567179	66567198	2	-1.2873
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	66568768	130195588	35245	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	130197796	130199728	3	-2.0072
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	4	130204663	188763651	31252	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	5	914233	26602440	15317	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	5	26602765	26602897	3	-1.1509
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	5	26603304	180360469	85167	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	1014281	148007144	82893	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	148008137	148008880	2	-1.8721
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	148014547	148501944	413	0.0154
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	148506612	148506944	2	-1.2517
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	148507255	149989457	1014	-0.0102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	149996720	149996994	2	-1.3573
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	6	149999787	170903919	12156	2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	7	705284	158385118	81315	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	8	617667	145232496	81517	2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	9	789932	140938752	68011	-3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	10	415240	135225087	80861	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	11	456120	126935277	72460	-0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	11	126936434	126936556	3	-1.0848
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	11	126938336	134142530	4776	0.0045
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	12	889902	13043119	6686	-0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	12	13338026	13393194	54	-1.0482
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	12	13403222	133161346	67179	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	13	19450806	31701807	7473	-2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	13	31703815	31705301	4	-0.9598
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	13	31705821	114987458	49166	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	20501368	24671969	1574	-0.0032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	24672267	24674085	5	-1.3096
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	24680926	39924407	9026	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	39925798	39926888	2	-1.3755
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	39931864	40362403	219	-0.0094
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	40363078	40401222	11	-0.9584
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	40408540	46590910	2359	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	46592058	46592177	2	-1.6795
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	46592900	54351297	4630	-0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	54351709	54355433	7	-0.6864
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	14	54355548	105988038	31597	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	15	23687685	101884307	44516	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	16	653459	89379936	40789	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	17	987221	80917016	36970	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	18	329586	77109240	42658	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	19	284018	36679997	14644	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	19	36680073	36689804	3	1.0327
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	19	36690874	39244081	1236	-0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	19	39249071	39308190	58	0.5178
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	19	39311087	58878226	8001	0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	20	455764	62219837	37269	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	21	15347621	47678774	20578	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	22	17423930	47935868	15756	-0.0012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	22	47937427	48159404	150	0.5707
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	22	48159634	48170030	13	0.8723
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	22	48174260	48298059	102	0.5161
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	22	48299386	49331012	902	0.0051
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C11_1388136	X	3157107	154905589	63577	0.0016
