Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	1	3218610	195801072	95969	0.0391
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	1	195801229	195801361	2	-1.2626
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	1	195803021	247813706	33118	0.0389
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	484222	155861503	81571	0.0565
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	155864017	155867242	2	-1.4295
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	155869776	155952091	22	-0.0147
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	155952670	155952929	2	-1.7466
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	155956409	164302967	4670	0.0274
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	164305030	164305343	3	-1.0641
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	2	164305358	242476062	44987	0.0276
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	2212571	32499817	18139	-0.1225
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	32502408	32510420	2	-1.5229
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	32510973	115396251	44590	-0.0804
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	115403693	115444503	35	-0.2433
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	115444779	174565782	31890	0.0353
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	174565977	174611182	33	-0.3535
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	3	174616090	197538677	11650	0.0436
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	1053934	74907879	40245	-0.1245
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	74909180	80042026	3217	0.2593
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	80045578	90558634	6231	-0.0905
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	90560310	90563210	2	-1.101
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	90565207	91246205	357	0.0308
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	91253956	91410243	60	-0.3129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	91411236	91822647	238	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	91822670	91920293	70	-0.3983
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	91924145	91925784	7	-0.1523
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	91937972	91938918	7	0.1425
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	91938935	92033255	69	-0.1801
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	92033266	94083726	840	0.0448
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	94084099	94084113	2	-1.0667
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	94094519	133441842	21643	-0.1024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	133447413	133626642	133	0.3597
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	4	133630196	188763651	29594	-0.0705
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	914233	3765085	1729	-0.1398
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	3766628	3768938	3	-1.2618
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	3769282	58906275	29822	-0.1293
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	58909254	58987512	56	-0.3416
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	58991354	59105651	64	-0.6158
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	59106857	67461604	4621	-0.1297
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	67463231	67464499	2	-1.4425
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	67465803	130965598	33936	-0.1298
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	130966026	130966782	2	-1.6047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	130967145	150892964	12053	-0.1328
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	150893593	150893640	2	-1.3197
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	150894433	173953424	15151	-0.1249
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	173953905	173954563	2	0.9985
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	173954569	176350686	1198	-0.1236
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	176359136	176359576	4	-1.0407
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	5	176363097	180360469	1812	-0.1415
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	1014281	12718377	8382	0.1774
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	12718501	12719126	2	-0.9484
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	12719392	160071844	82553	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	160074418	160074445	2	-1.1624
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	160075703	162636455	1746	0.0427
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	163122220	163207583	42	-0.3572
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	6	163210368	170903919	3733	0.0483
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	7	705284	11508848	4399	0.3749
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	7	11511684	110749763	51941	0.0549
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	7	110751926	110775098	18	-0.5586
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	7	111353361	158385118	24949	-0.0311
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	617667	42933372	24744	-0.1321
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	47460945	79396271	18342	0.1631
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	79401190	91223560	6249	0.4214
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	91226835	91226940	2	-0.6781
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	91227381	95178377	2222	0.4926
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	95180113	95242876	60	1.046
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	95243062	95556403	169	0.7733
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	95556443	95570545	19	0.3426
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	95576350	96316141	444	0.6622
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	96317910	96759219	305	0.4404
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	96759285	100696695	2283	0.8229
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	100703449	101825384	617	0.4181
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	101827314	112413796	5772	0.1635
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	112414703	113368625	501	0.5183
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	113372194	113479594	83	0.8693
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	113481526	114235947	364	0.1476
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	114238561	115551815	691	0.5291
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	115623858	116530073	445	0.7607
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	116530963	116771793	145	0.4135
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	116772461	119629654	1948	0.1682
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	119630158	121211312	1076	0.8857
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	121211847	122059049	548	0.5534
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	122059475	125733120	2361	1.0676
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	125742166	125745928	4	1.8652
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	125745994	126414034	419	0.9115
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	126416325	127185275	597	0.5887
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	127187161	127195856	12	1.0236
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	127198787	127942683	538	0.6322
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	127949209	129420534	1090	0.8875
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	129423936	129630950	160	1.1419
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	129631541	129701533	42	0.842
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	129701949	136649677	5084	0.3592
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	136653104	136725472	56	0.6331
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	8	136725731	145232496	4117	0.1895
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	9	789932	78068102	28115	-0.2172
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	9	78068209	78068839	4	-1.5966
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	9	78069679	140938752	39885	-0.1224
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	10	415240	2683676	1278	-0.1387
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	10	2684075	11613040	6654	0.2214
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	10	11615815	77435620	36251	-0.1004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	10	77438299	77577699	104	-0.539
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	10	77584134	135225087	36549	-0.1242
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	11	456120	109780031	60356	0.0124
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	11	109787226	109787314	3	-1.0815
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	11	109792702	134132624	16861	0.0371
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	11	134137133	134142530	3	-0.3941
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	889902	24393754	13708	0.2966
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	24395202	24395272	3	-0.9303
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	24396944	33521107	5846	0.2974
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	39223566	53393448	7730	-0.1169
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	53405499	55917529	1292	0.1641
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	55918991	58006345	975	0.5327
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	58007233	58476461	233	0.8548
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	58476489	58490925	15	0.4963
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	58491964	58937603	344	0.3075
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	58937617	59186843	189	0.5407
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	59188641	60666413	947	0.1738
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	60669725	95620755	21237	-0.1326
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	95624576	96034350	291	0.5354
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	96034683	105882613	6338	0.1628
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	105884621	105886356	2	-1.324
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	12	105888342	133161346	14762	0.1592
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	13	19450806	114987458	56639	0.1812
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	14	20501368	103692961	48667	0.0366
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	14	103702831	103707881	5	-1.0856
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	14	103710021	105988038	746	0.0316
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	15	23687685	24138517	331	-0.0945
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	15	24139438	24139537	2	-1.1246
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	15	24142067	91357488	37681	-0.1254
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	15	91358226	101884307	6490	0.1429
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	16	653459	78585129	33700	-0.0891
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	16	78586507	78738739	142	-0.3482
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	16	78739257	89379936	6929	-0.0383
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	17	987221	12245838	6150	0.153
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	17	12251477	21109151	3407	-0.1434
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	17	21109223	21110432	2	-1.5261
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	17	21112905	80917016	27399	-0.1373
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	18	329586	13412537	7675	-0.1055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	18	13419320	22543611	2757	0.1289
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	18	22544756	51518850	18164	-0.1404
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	18	51536447	52653837	587	0.3522
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	18	52659540	77109240	13457	-0.1993
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	19	284018	17272050	6570	-0.1372
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	19	17275050	48941257	13439	0.1387
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	19	48941276	48942855	2	-1.1757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	19	48943921	58878226	3928	0.144
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	20	455764	14687769	8972	0.1749
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	20	14690185	15299479	92	-0.1276
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	20	15322241	62219837	28203	0.3253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	21	15347621	47678774	20569	-0.1328
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	22	17423930	42175847	12064	-0.1107
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	22	42177453	42178441	3	-1.3744
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	22	42178562	49331012	4849	-0.1084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	3157107	19310825	6374	-0.0078
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	19312264	19314086	3	-2.3064
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	19316004	37709565	8874	-0.009
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	37710749	37714857	3	-2.5933
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	37714959	104014377	25004	0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	104019394	104024040	2	-2.2194
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	104025829	104428586	226	-0.008
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	104428697	104572607	85	-0.4597
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_C12_1388092	X	104587335	154905589	22797	1e-04
