Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	1	3208470	245880329	129053	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	2	474222	242124735	131288	0.0057
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	3	526235	100257711	53498	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	3	100260309	100263027	2	-1.2623
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	3	100264095	124409564	13751	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	3	124411484	124436656	20	-0.4446
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	3	124439281	199023074	39097	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	4	1043934	133659583	73001	1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	4	133661292	133849646	135	0.542
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	4	133854487	134682266	357	0.0237
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	4	134687379	134687511	2	-1.4887
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	4	134690002	189836143	29236	0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	5	967233	102093080	53522	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	5	102098781	102100360	2	-1.2873
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	5	102104449	176283292	45147	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	5	176291742	176292182	4	-0.9822
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	5	176295703	180293075	1812	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	6	959281	170745844	96473	0.0012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	7	671810	158077879	81311	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	8	607667	145304484	81508	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	9	779932	97266180	41627	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	9	97266224	97266521	2	-1.4303
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	9	97266571	133675817	23566	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	9	133676107	133679142	2	-1.3402
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	9	133680851	140058573	2807	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	10	405240	135075077	80861	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	11	446120	133647740	77248	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	12	760163	131671419	73929	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	13	18348806	106180636	51896	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	13	106182239	106182711	2	-1.6318
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	13	106183236	114005560	4750	-0.0045
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	14	19571208	102762714	48686	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	14	102772584	102777634	5	-1.0963
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	14	102779774	105059083	746	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	15	21238778	99701830	44517	-0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	16	593460	73782523	31204	-0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	16	73785470	73785484	2	1.3206
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	16	73787130	87907437	9648	-0.0071
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	17	933971	78510305	36972	-0.0042
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	319586	21718647	11025	-0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	21728345	21729732	2	-1.2875
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	21730446	22636691	571	0.0171
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	22637098	22637353	2	-1.1829
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	22637917	28290541	3447	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	28291480	28291584	2	-1.352
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	18	28291643	75210228	27610	-0.0012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	19	235018	9290367	2944	-0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	19	9291987	9292599	2	-1.2395
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	19	9297619	63570038	20995	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	20	403764	40077099	22836	-0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	20	40078139	40078212	2	-1.8849
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	20	40079104	61690281	14429	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	21	14269492	46503202	20579	-0.0034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	22	15803930	47717016	16926	-0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	X	3167107	8743280	896	-0.0098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	X	8746719	8749654	3	-2.027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D01_1388006	X	8750633	154558783	62639	0.0021
