Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	3208470	21763857	10213	-0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	21764321	21764330	2	-1.7374
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	21766894	30493175	4158	0.0079
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	30493323	30493578	2	-1.4465
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	30494031	30764516	196	-0.0147
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	30765034	30765489	3	-0.8871
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	30768015	30784213	19	0.0468
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	30786362	30787461	3	-1.2924
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	30788314	44351908	7360	0.006
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	44352245	44358467	3	-1.3562
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	44358758	69582321	15844	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	69583572	69593735	3	1.3204
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	69597422	113082711	25459	-0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	113083220	113083872	2	-1.7646
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	113085602	220360319	49847	2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	220361518	220363598	6	-1.0472
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	220364865	220829396	239	-0.0111
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	220829838	220831414	4	-1.4568
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	220834066	229051288	4836	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	229055327	229055347	2	-2.5536
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	1	229058757	245880329	10838	0.0081
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	2	474222	207142832	110083	0.0053
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	2	207146738	207147898	2	-1.8315
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	2	207149833	242124735	21187	0.0082
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	3	526235	7528145	2748	0.0072
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	3	7528165	7528261	4	-1.2347
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	3	7533865	12604965	3438	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	3	12605760	12784220	141	0.8618
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	3	12786628	199023074	100026	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	1043934	109710013	59993	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	109711881	109739714	3	-1.5734
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	109749774	129417852	11026	-0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	129419465	129420128	3	-1.7813
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	129423790	163219100	18454	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	163219635	163219859	2	2.0253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	163224182	177381948	7583	0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	177382833	177385755	8	-0.8525
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	177388303	181292610	2021	-0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	181293620	181293988	2	-2.2002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	4	181294234	189836143	3624	0.0129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	967233	98135041	52284	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	98136549	98136929	3	-1.6448
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	98139212	122337759	12989	-0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	122341433	122341498	3	-1.4063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	122343107	172915175	31352	0.0042
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	172915885	172917168	5	-1.0312
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	5	172919889	180293075	3839	0.0116
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	959281	2261807	960	0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	2263418	2263448	2	-1.6839
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	2263629	5986708	2573	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	5986834	5987428	8	-0.8844
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	5989117	25055784	13306	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	25059178	25059788	5	-1.4367
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	25062214	158426442	73054	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	158426464	158426859	3	-1.4614
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	158427828	164865828	3915	0.0154
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	164868147	164868292	2	-1.9606
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	164870908	169301020	1969	-0.0154
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	169301937	169304397	4	-1.3221
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	6	169304667	170745844	663	-0.0253
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	671810	16136183	7778	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	16138085	16138784	2	1.8943
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	16143366	24001652	4405	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	24006403	24006908	2	1.7047
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	24007342	51051034	17513	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	51051316	51051815	4	-1.1613
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	51054516	55065293	2695	0.0105
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	55067278	55067331	3	-1.6149
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	55067346	75275621	5744	0.0129
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	75276699	75276716	2	-1.6287
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	75277632	90483507	7380	-0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	90484328	90490770	9	-0.7393
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	90492651	135360284	24087	-3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	135360976	135361700	2	-1.6001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	135364285	142286451	3690	0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	142290051	142290310	3	-1.2967
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	142291410	153727133	5448	0.0117
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	153727573	153728507	2	-1.6572
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	153728665	157873870	2460	0.0084
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	157874790	157875441	2	-1.6632
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	7	157875810	158077879	77	0.0303
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	8	607667	73357595	39470	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	8	73359601	73359709	2	-1.7837
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	8	73360495	145304484	42037	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	779932	18364849	10742	0.0032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	18370910	18370943	2	-2.1862
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	18371358	18988656	611	0.0117
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	18994567	18997945	2	-1.324
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	18998550	20673404	1235	0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	20674602	20674778	2	-1.7378
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	20675097	89550700	24271	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	89552906	89553226	4	-1.4055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	89553424	126076659	24131	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	126080799	126081156	2	-2.0443
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	9	126086665	140058573	6997	-0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	10	405240	135075077	80853	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	446120	1586753	344	0.0079
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	1588242	1589076	5	-1.1556
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	1591537	3223707	633	0.0215
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	3320743	3320814	2	-1.6421
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	3320934	34903931	21029	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	34903946	34908303	17	-0.5733
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	34912417	106732690	37027	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	106734974	106735158	4	-1.341
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	106735337	126294615	13269	-0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	126298017	126298028	2	-2.4886
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	11	126298101	133647740	4910	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	12	760163	25257801	14221	-0.0037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	12	25258003	25269656	27	-0.505
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	12	25269675	131671419	59672	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	13	18348806	114005560	56646	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	14	19571208	105059083	49432	2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	15	21238778	99701830	44514	-0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	16	593460	85222369	39729	0.0012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	16	85222960	85224026	5	-1.4789
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	16	85224403	87907437	1109	-0.0131
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	933971	9419399	4249	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	9420401	9420602	2	-2.2294
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	9422409	17088350	3838	-0.008
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	17091866	17092663	2	-1.5812
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	17098387	28872798	4782	0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	28875988	28877088	4	-1.15
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	28877187	42780176	5313	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	42783505	42797018	2	-2.0115
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	42799867	68301245	14668	-0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	68304152	68306057	4	-1.2896
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	17	68307530	78510305	4104	-0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	319586	42522646	23640	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	42527088	42527123	2	-1.707
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	42529620	57138014	9614	-0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	57141400	57141926	3	-1.3999
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	57144275	59073831	1299	-0.01
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	59075406	59075593	6	-1.1909
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	59075950	71073346	5371	-0.0058
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	71076234	71076920	3	-1.4949
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	18	71077358	75210228	2718	-0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	19	235018	63570038	23936	0.0076
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	20	403764	43240886	24955	0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	20	43243001	43244375	5	-1.0195
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	20	43247050	61690281	12300	-0.0062
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	21	14269492	46503202	20577	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	22	15803930	28479778	4886	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	22	28480327	28480549	2	-1.8005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	22	28483271	47717016	12037	-0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	X	3167107	6318412	669	0.0054
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	X	6320778	6321722	6	-1.1585
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	X	6322411	104760169	40171	0.0032
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	X	104762268	104762851	8	-1.3273
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_D09_1388004	X	104763545	154558783	22757	0.0018
