Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	1	3218610	27981437	13019	-0.0619
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	1	27981827	27981867	2	-1.61
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	1	27985070	73786981	26836	-0.0623
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	1	73787334	73794231	5	-1.4285
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	1	73794643	247813706	89147	-0.0669
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	2	484222	71298338	41555	-0.0584
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	2	71305149	71312698	11	0.8684
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	2	71314864	153584421	38692	-0.0585
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	2	153596646	153596919	2	1.5669
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	2	153599749	242476062	50943	-0.0607
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	3	2212571	41085981	23249	-0.0674
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	3	41093575	41145025	49	-1.2673
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	3	41147557	197538677	82987	-0.0721
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	1053934	4406259	1297	-0.0724
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	4406263	4406716	2	-1.3636
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	4407217	21542260	11343	-0.0758
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	21543815	21566178	31	0.2763
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	21566700	28388218	4409	-0.075
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	28400119	28400305	2	-1.591
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	28400914	40566874	7179	-0.0788
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	40569967	40575251	3	-1.1496
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	4	40579012	188763651	78434	0.112
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	914233	3563179	1552	0.233
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	3566830	3579516	24	-0.7979
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	3580244	24285479	12553	0.222
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	24290009	24291164	3	-0.8177
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	24294294	169863263	80696	0.0613
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	169865293	169869644	5	-1.0835
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	5	169870314	180360469	5636	0.035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	6	1014281	170903919	96429	-0.0958
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	7	705284	158385118	81280	0.1402
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	8	617667	117655571	63981	-0.0611
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	8	117656116	117662811	3	-1.2161
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	8	117667551	145232496	17523	0.0393
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	9	789932	140938752	67961	0.0197
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	10	415240	19142348	13373	0.0165
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	10	19142446	19144709	4	-1.2941
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	10	19146547	44375711	13631	0.0181
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	10	44375912	44375925	2	-3.0461
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	10	44376205	135225087	53807	0.0196
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	456120	32922913	20739	-0.0645
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	32924101	42946737	6199	0.2145
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	42947540	59763088	5641	-0.004
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	59793688	60223018	317	0.2424
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	60231815	60608654	212	0.4992
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	60608817	61371644	377	0.8519
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	61383683	61841538	230	0.6376
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	61845986	61885073	19	0.9784
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	61886672	61893569	9	0.2573
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	61894010	66015773	1367	-0.0593
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	66016947	68448291	744	0.5344
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	68462084	68721372	148	0.9091
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	68724270	69147825	233	0.6256
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	69148114	69195097	31	0.3329
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	69198151	69378833	118	-0.0571
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	69380898	69411503	25	0.2519
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	69412192	69608132	107	0.7076
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	69610448	70249187	314	0.4366
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	70251812	77666487	3857	-0.0629
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	77667165	79312359	1217	0.213
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	79314108	91599116	7372	-0.0698
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	91603695	91604048	2	-1.9668
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	11	91604194	134140152	27911	-0.0701
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	12	889902	133161346	73897	0.0354
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	13	19450806	114987458	56625	0.1245
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	14	20501368	78406473	32534	-0.0328
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	14	78406565	78407250	2	-1.5147
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	14	78407296	89909395	7292	-0.0699
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	14	89910853	89914696	6	-1.4905
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	14	89915624	105988038	9576	-0.0704
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	23687685	25889682	1121	0.0267
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	25891224	25891511	3	-1.0189
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	25894658	35017499	3560	0.03
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	35020391	35038632	20	0.5388
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	35041745	39261250	2832	0.0231
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	39262001	39262165	4	-0.9219
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	39262308	50954947	6378	0.03
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	50957369	50957625	2	-1.2467
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	50959178	76194389	15682	0.0355
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	76196674	76196803	2	-1.4089
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	76198000	76483342	155	0.0805
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	76484830	76484993	2	-1.144
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	76485536	80923081	2565	0.0327
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	80923685	80930627	6	0.9538
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	15	80930742	101884307	12162	0.0279
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	16	653459	89379936	40767	-0.0704
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	17	987221	80400755	36659	0.0363
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	17	80400894	80411462	3	1.1945
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	17	80415914	80917016	296	0.0192
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	18	329586	77109240	42640	-0.0116
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	19	284018	54429450	21839	0.0281
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	19	54429513	54430142	2	-1.7163
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	19	54430528	57693938	1496	0.0322
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	19	57696356	57696385	2	-1.2277
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	19	57712505	58878226	593	0.0319
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	20	455764	11470255	6994	0.1279
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	20	11473187	11473517	2	-1.3933
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	20	11473890	12370865	556	0.1048
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	20	12376169	12377411	3	-1.3967
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	20	12377990	62219837	29714	0.128
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	21	15347621	47678774	20568	-0.0887
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	22	17423930	42092986	12016	-0.0267
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	22	42096694	42098099	2	-1.4407
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	22	42099168	49331012	4901	0.0282
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	3157107	8783280	892	-0.1302
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	8786719	8792883	5	-1.0177
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	8794081	13475717	2780	-0.0105
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	13476785	13482691	6	-1.5077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	13483573	31735398	9156	0.0077
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	31737203	31743305	11	-0.6186
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	31743320	53058766	8965	0.007
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	53069998	53144309	39	-0.3298
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	53147277	116852877	24312	0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	116856463	116861224	21	-0.7246
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	116861624	119798916	1571	0.0107
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	119802147	119802621	2	-2.4899
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	119806398	135664732	7046	0.0157
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	135666848	135687009	18	-0.6029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_F09_1438556	X	135687560	154905589	8524	0.0056
