Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	3208470	22850470	10687	-0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	22853201	22853273	2	-2.5622
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	22853351	29638707	3012	0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	29638736	29650688	4	-1.4683
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	29650700	64129146	20086	0.0059
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	64131912	64134861	4	-2.5612
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	1	64139247	245880329	94776	1e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	474222	20251631	12829	-0.0035
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	20251924	20261383	5	-1.0082
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	20263537	20264037	3	-3.7915
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	20265385	46176455	14341	0.0039
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	46180173	46180247	2	-2.1795
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	46181682	70795321	14059	5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	70796926	70797524	3	-5.4185
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	70798000	127749016	25094	0.0039
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	127753948	127754224	2	-4.438
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	127754535	128840911	513	-0.0342
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	128841389	128842442	2	-2.7228
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	128842783	128851578	9	-0.0261
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	128851901	128855472	3	-1.7783
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	128859822	224640483	53766	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	224641143	224641627	2	-3.0492
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	2	224644161	242124735	10288	0.0074
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	3	526235	195542170	105074	-0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	3	195543521	195544214	2	-3.3811
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	3	195544944	199023074	985	-0.0062
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	1043934	7241797	3307	-0.0049
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	7250033	7260486	10	-0.8462
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	7261490	26096646	12531	-0.0033
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	26100866	26101072	2	-2.805
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	26101571	67967686	21294	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	67978054	67978499	2	-1.7996
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	67979486	83234014	7906	-0.0158
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	83237101	83237298	2	-2.7002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	83238372	149281643	36379	-0.008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	149282725	149282830	2	-2.0777
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	149288640	154697527	2783	-0.0088
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	154698880	154699178	2	-1.872
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	4	154701296	189836143	18295	-0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	5	967233	33859638	19683	-0.0067
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	5	33860011	33860888	2	-2.4611
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	5	33863960	89658424	28022	-0.0064
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	5	89658447	89662835	3	-2.4525
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	5	89667985	180293075	52496	-0.0055
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	959281	130500212	71927	-0.001
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	130502285	130505091	5	-1.7422
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	130506734	137984031	5013	0.0054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	137988901	137989398	2	-1.7955
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	137989681	145427709	4194	0.0016
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	145430251	145430690	2	-1.6082
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	6	145436812	170745844	15072	-0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	7	671810	117157568	59442	-0.0072
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	7	117167858	117168011	2	-2.211
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	7	117169042	158077879	21610	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	607667	31232170	18079	-0.0017
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	31233907	31234783	2	-2.1751
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	31234882	96275096	33967	-0.004
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	96275729	96276496	3	-1.7698
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	96277263	125708636	17103	-0.0054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	125710145	125712963	2	-1.6231
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	125719061	127948678	1579	0.0044
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	127948705	127949067	2	-2.4952
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	8	127950034	145304484	10576	-0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	779932	77491380	28204	-0.0138
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	77491743	77493107	2	-2.1368
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	77495078	98101258	13983	0.0019
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	98101793	98104117	2	-2.3888
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	98104609	100338528	1244	-0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	100339040	100339166	2	-1.7348
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	100341476	115980239	10230	-0.0054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	115980310	115989543	3	-1.9091
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	115993572	120265228	3179	-0.0032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	120265483	120266443	2	-3.5901
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	120266677	121031745	485	0.0214
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	121032370	121032507	2	-3.2334
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	9	121033329	140058573	10381	-0.0053
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	405240	29215537	19768	0.0099
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	29216564	29221185	2	-2.7542
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	29221592	50540386	9575	0.0191
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	50541722	50542918	3	-4.2058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	50543597	79621471	16601	0.0094
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	79621963	79622694	3	-1.5052
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	79622940	83964067	2430	0.0073
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	83967049	83970675	2	-3.4428
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	83972520	129847789	29757	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	129848937	129849048	2	-2.4249
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	10	129855560	135075077	2405	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	446120	7824539	3780	-0.0038
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	7826106	7826496	3	-1.5671
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	7835752	42241041	22601	3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	42243624	42283729	28	-0.9542
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	42284468	44667401	1602	-0.0104
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	44667510	44667757	3	-1.7141
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	11	44667900	133647740	48931	0.0015
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	12	760163	94300991	52505	-0.0029
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	12	94301449	94301659	2	-2.4794
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	12	94303479	123365537	17367	-3e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	12	123368433	123368591	2	-2.718
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	12	123368984	131671419	3830	-0.0018
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	13	18348806	30591778	7419	9e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	13	30592120	30592134	2	-1.9433
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	13	30592243	114005560	49076	0.0061
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	14	19571208	33637676	7602	-0.011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	14	33640215	33640717	2	-3.032
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	14	33643266	54298459	10784	0.0056
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	14	54301254	54302848	2	-3.5792
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	14	54303168	105059083	30865	8e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	15	21238778	36834503	7378	-0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	15	36834621	36834731	2	-2.4079
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	15	36835058	64713833	16801	-0.0047
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	15	64715523	64715597	3	-4.1426
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	15	64716628	99701830	20146	0.0057
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	16	593460	1508466	133	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	16	1509203	1509253	2	-3.1835
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	16	1509406	64021010	25914	0.0027
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	16	64021211	64021256	2	-3.4516
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	16	64021526	87907437	14634	-0.0041
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	17	933971	2209976	498	0.0013
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	17	2210773	2211229	2	-3.4307
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	17	2216519	78510305	36337	-0.0034
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	319586	37649876	20703	-0.0025
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	37650755	37650800	2	-1.8054
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	37652766	45716326	5020	0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	45716655	45717095	2	-2.1562
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	45717686	52091762	4159	-0.0132
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	52095856	52096196	2	-1.5745
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	52098474	52895843	462	-0.0108
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	52897154	52897216	2	-2.1435
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	18	52897516	75210228	12173	0.008
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	19	235018	4980463	1092	-0.0058
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	19	4984753	4990135	5	-1.494
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	19	4992178	6064453	452	-0.0244
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	19	6066951	6067805	2	-3.6217
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	19	6069233	63570038	22297	0.0154
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	20	403764	61690281	37116	0.002
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	14269492	16607824	1414	-0.0119
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	16615536	16615709	2	-2.0781
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	16619455	42157684	16998	0.0092
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	42158495	42160134	6	-1.0614
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	42160691	42617431	359	-0.0146
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	42617671	42618199	3	-1.3856
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	21	42618648	46503202	1747	-5e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	15803930	32014425	7017	0.005
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	32015739	32016409	2	-1.8265
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	32019100	43197300	6599	-0.0042
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	43199758	43199904	2	-1.8678
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	43201186	46207310	1983	0.0114
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	46208861	46209441	2	-1.6396
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	46210549	47211457	871	-0.0092
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	47212863	47214509	3	-5.5799
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	22	47214681	47717016	352	-0.0759
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	3167107	44906128	18651	4e-04
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	44906142	44906289	2	-2.4309
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	44906878	96856883	18106	-0.0011
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	96856888	96863001	25	-0.6283
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	96864528	138545940	19679	-0.0028
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	138546158	138548962	6	1.2962
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	138549153	147345232	4279	-0.0095
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	147345728	147348590	2	2.1616
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	147352454	149132280	708	0.0135
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	149137475	149142719	2	-2.0628
CUPEL_p_TCGAb_370_371_372_NSP_GenomeWideSNP_6_G02_1438572	X	149153133	154558783	1764	0.009
