Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	3218610	14176750	5586	-0.023
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	14180153	14192950	14	-0.7187
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	14194792	195808538	90414	-0.0036
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	195814735	195814883	2	-1.4818
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	195815418	208013620	7249	-0.0048
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	208014922	208017452	2	-1.1292
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	208017915	209258132	1010	0.0023
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	209258715	209259013	2	-1.2122
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	209261664	220761607	7885	0.0014
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	220762524	220762910	2	-2.0419
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	1	220765879	247813706	16975	-0.0036
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	484222	50831734	30161	0.0099
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	50837494	50837708	2	-1.6243
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	50839206	57551479	3233	0.0124
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	57552076	57552412	2	-1.4248
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	57554649	116529287	27435	0.0082
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	116677828	152476408	18730	-0.6675
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	152478273	165853974	7551	0.0187
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	165857581	165864049	4	-0.9293
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	165865439	211529922	25315	0.0211
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	211536269	211593503	50	0.5037
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	211634362	229061402	11053	0.0135
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	229067610	229136948	36	0.4255
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	2	229137908	242476062	7691	-0.0022
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	2212571	39814656	22498	-0.007
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	39817413	39817494	2	-2.0138
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	39817957	59705135	10905	-0.0074
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	61026351	61098164	81	-0.6688
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	61100049	64989200	3032	-0.0021
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	64990756	65010837	19	0.5002
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	65010894	89944100	14235	-0.0056
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	89951867	90153534	76	0.5191
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	90154546	110833210	9186	0.0035
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	110836281	110836338	2	-2.6755
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	110838735	174403767	34567	0.0046
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	174418538	174575228	98	-0.6555
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	174579438	174581888	8	-2.1789
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	174582577	174631176	31	-0.7381
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	3	174634510	197538677	11642	0.0106
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	1053934	92209009	50607	0.0021
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	92211341	92691639	218	0.493
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	92695400	130502750	20877	0.0056
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	130502836	130503096	5	-0.7133
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	130503425	135780220	2273	-0.0182
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	135780372	135780487	4	-1.0545
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	135785349	174949704	21888	0.0037
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	174952040	174952248	3	-0.8994
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	4	174952885	188763651	6874	-0.0014
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	5	914233	58319617	31131	-0.0039
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	5	58328561	58410221	83	-0.671
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	5	58419807	180360469	69309	1e-04
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	1014281	2103936	840	0.0119
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	2106309	2220630	74	0.4791
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	2222157	80602960	42975	-5e-04
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	80605249	80605822	2	-1.3414
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	80606719	104239651	13074	-0.0033
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	104240245	104240500	2	-1.1759
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	104241493	128312091	13729	0.0057
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	128312298	128339840	21	-0.6837
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	128341282	162483614	21981	0.0104
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	162595372	163145416	34	-0.7482
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	6	163152563	170903919	3765	-0.005
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	705284	110305009	56096	0.2278
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	110309543	110423443	80	-0.2945
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	110426799	123876402	6956	0.2392
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	123878512	133471294	5124	-0.3378
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	133473105	151097901	9352	0.2264
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	151099228	151099441	2	-1.0575
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	7	151101253	158385118	3712	0.2168
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	617667	79523685	43169	-0.0025
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	79528094	79581531	26	-0.7062
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	79581628	84959054	2926	-4e-04
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	84959471	84962337	2	1.1216
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	84965998	85470686	265	-0.0312
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	85470964	85478866	2	-1.4124
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	8	85479541	145232496	35154	-0.0036
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	789932	4785307	2867	0.0037
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	4788621	4791680	4	-0.7477
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	4792098	9238929	2361	-0.0068
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	9411107	9448876	41	-0.7161
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	9450505	9468051	20	0.0797
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	9468468	9691328	133	-0.7382
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	9697244	9716152	14	0.1379
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	9719040	9861098	94	-0.5966
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	9862171	10047099	65	-0.0536
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	10055437	10074400	15	0.478
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	9	10075300	140938752	62418	-0.0045
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	10	415240	135225087	80872	-0.0047
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	11	456120	33742811	21125	-0.0048
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	11	33743429	33744877	5	-0.8678
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	11	33746227	121151560	47178	-0.0042
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	11	121151893	121151902	2	-1.348
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	11	121154837	134142530	8955	-0.0102
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	12	889902	120459494	68103	5e-04
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	12	120466434	120543406	45	-0.6568
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	12	120546927	133161346	5804	-0.0148
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	13	19450806	114987458	56634	-0.0029
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	14	20501368	63189213	23486	-6e-04
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	14	63189770	63189783	2	-1.5662
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	14	63191094	105988038	25961	-0.0144
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	15	23687685	101884307	44529	-0.0075
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	653459	73381706	29997	-0.017
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	73390284	73391142	5	-0.7489
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	73393321	76059715	1505	-0.009
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	76062978	76063417	2	-1.5902
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	76070637	81421977	4498	-0.0282
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	81425105	82159665	591	-0.7265
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	82219441	82959182	763	-0.0399
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	82976141	83142734	46	-0.698
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	16	83143809	89379936	3392	-0.0307
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	987221	36664341	14686	-0.0219
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	36669432	36669464	2	-1.4544
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	36671149	49903258	5688	-0.0218
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	49905599	49925879	23	0.4877
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	49926090	78212495	15656	-0.0128
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	78214199	78214288	2	-1.2515
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	17	78215364	80917016	922	-0.0377
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	18	329586	59691580	33783	3e-04
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	18	59694919	59696098	3	-0.926
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	18	59696613	77109240	8882	-0.0373
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	19	284018	58878226	23950	-0.0249
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	20	455764	62219837	37277	-0.0111
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	21	15347621	47678774	20577	-0.0128
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	22	17423930	49331012	16930	0.1983
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	X	3157107	150462517	62631	0.0134
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	X	150463133	150464349	4	-3.3079
CUBES_p_TCGAb_425_426_427_NSP_GenomeWideSNP_6_G09_1514086	X	150465164	154905589	1119	0.0155
