Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	1	3218610	42633179	20720	0.0266
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	1	42635359	42635505	2	-1.8231
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	1	42637613	247813706	108055	0.0014
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	484222	18123412	11144	0
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	18124348	18125184	3	-1.5131
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	18125437	49331940	17860	0.0016
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	49332897	49337976	3	-1.6102
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	49340661	66343579	9277	-0.0068
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	66349602	66365846	23	-1.0546
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	66376147	128032386	28060	-0.0098
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	128032527	128038065	4	-2.6491
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	128039407	141717646	6731	-0.0211
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	141718009	141741350	28	-0.6117
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	2	141747293	242476062	57815	-0.0045
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	2212571	2236665	19	0.2937
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	2236778	3853378	1032	-0.6477
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	3853912	3854291	3	-3.2355
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	3855039	9067062	2833	-0.5865
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	9069468	18687977	6059	0.4038
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	18689498	24130895	2597	-0.5959
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	24139134	27786337	2281	0.4005
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	27792593	35318575	4761	0.0043
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	35325354	36976926	1039	-1.6249
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	36981363	36982896	2	-6.9916
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	36983334	37175960	93	-1.5772
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	37176599	53545562	8342	-0.5623
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	53548929	59705135	4160	-0.0122
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	61026351	87060122	15914	0.383
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	87061009	87075666	14	-0.6172
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	87082814	87101747	12	-0.0049
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	87103176	89508500	1274	-0.5709
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	89518332	89658407	43	0.0272
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	89660314	90485962	236	-0.5814
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	93734671	159716107	36458	-0.0095
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	159716352	159719132	3	-1.9221
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	3	159720504	197538677	18896	0.01
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	1053934	10726853	5087	0.0027
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	10728574	10728594	2	-1.5505
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	10728673	39695626	18749	-0.0172
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	39699024	39699395	3	-1.7563
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	39700694	136142498	50196	-0.0103
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	136147584	136148697	2	-1.7318
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	136154293	142220324	3727	-0.0151
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	142220514	142220987	3	-1.0927
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	142222787	142982398	441	2e-04
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	142986693	142989192	5	-1.1789
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	142991380	185316897	22672	-0.0192
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	185317499	185320632	2	-1.7932
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	4	185324187	188763651	1672	-0.001
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	914233	6019087	3546	-0.0353
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	6023156	6141136	85	-1.1845
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	6141688	117189632	58670	-0.0142
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	117198788	117235680	28	-1.0964
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	117238471	127279115	5815	-0.0089
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	127279676	127285152	2	-2.1656
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	127289062	164833618	22839	-0.0145
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	164836256	164846459	4	-1.366
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	5	164846777	180360469	9266	-0.0119
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	1014281	3280160	1676	-0.5654
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	3280621	3281414	3	-4.4762
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	3281726	9086313	4186	-0.6
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	9086358	9087984	2	-2.9658
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	9088067	10112415	649	-0.6037
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	10112580	10118631	3	-2.3573
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	10127684	22563888	8523	-0.5922
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	22565090	22565152	2	-2.8005
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	22568063	26027433	2228	-0.5835
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	26030492	26031811	3	-2.5593
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	26033506	27726731	502	-0.5643
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	27732098	27858421	58	-0.1421
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	27867456	32973878	1261	-0.5878
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	32974343	32975014	2	-3.1958
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	32975257	39004724	3453	-0.5614
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	39024716	39024839	3	-2.5276
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	39026703	57206485	11016	-0.5727
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	62234533	72808603	5704	-0.0319
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	72808956	72808971	2	-2.7024
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	72808983	91853212	10875	-0.0047
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	91854474	92179462	94	0.3828
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	92182269	122937413	16936	-0.0111
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	122937612	122937783	2	-1.9611
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	6	122939253	170903919	28856	-0.0086
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	705284	2202374	404	0.0212
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	2203345	2380168	45	-0.8087
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	2452727	16060201	7232	0.0022
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	16061008	16061486	2	-2.4111
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	16067809	38741626	14276	0.001
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	38741848	38741976	2	-1.4895
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	38747782	42536767	2451	-0.0461
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	42537711	42537938	2	-2.1096
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	42538185	55300905	8199	-0.0248
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	55302440	55302832	2	-1.4988
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	7	55304166	158385118	48533	0.0025
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	617885	42933372	24691	-0.0134
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	47460945	51454010	1845	0.6484
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	51458310	51458817	3	-0.642
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	51459368	70954354	11525	0.6512
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	70954676	70954834	4	-0.8735
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	70961161	113959627	23926	0.6605
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	113961676	113961958	2	-0.9329
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	8	113965885	145232496	19472	0.6538
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	789932	10134760	5645	0.0029
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	10165856	10207930	37	-0.6577
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	10213960	37673088	16801	0.0083
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	37676472	37676899	2	-1.8203
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	37677133	78397885	5850	0.0113
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	78401762	78401869	2	-2.4245
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	78402231	121631635	28822	0.0036
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	121632541	121632702	2	-2.6107
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	9	121636210	140938752	10686	0.0333
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	415240	50506825	29105	-0.0147
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	50507362	50507454	2	-2.025
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	50507938	109132033	34605	-0.0116
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	109132303	109132638	10	0.5992
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	109133617	124577596	10704	2e-04
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	124577757	124577881	2	-2.0059
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	10	124579335	135225087	6187	-0.0137
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	456120	81426448	43293	0
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	81426995	81427445	2	-2.1212
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	81428870	110359201	17296	-0.0167
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	110359223	110361447	2	-2.284
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	110365144	111297168	716	0.0253
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	111297549	111297725	3	-0.8836
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	111298080	115585421	2919	-0.0273
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	115586744	115590578	2	-4.4324
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	115591365	126310082	7499	-0.0078
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	126310119	126315024	2	-1.7835
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	11	126315727	134142530	5290	-0.0117
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	12	889902	133161346	73778	0.0031
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	19450806	29185822	5553	-0.0051
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	29186138	29187211	4	-1.582
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	29187679	69453496	22519	-0.0114
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	69459562	69462019	3	-2.3615
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	69462095	112170067	27319	-0.0168
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	112171024	112171113	2	2.3117
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	13	112174319	114987458	1121	-0.0132
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	14	20501368	23842739	1113	0.0114
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	14	23843834	23843854	2	-2.0847
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	14	23844193	66082751	24060	-3e-04
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	14	66091473	66335141	162	0.3876
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	14	66336353	105988038	23977	-2e-04
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	15	23687685	101884307	44423	0.0108
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	16	653459	11237184	5639	0.0091
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	16	11244155	11244194	2	-2.0562
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	16	11244238	86770924	34016	-5e-04
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	16	86771069	86771845	3	1.8869
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	16	86774324	89379936	984	-0.0034
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	17	987221	80917016	36880	0.0239
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	18	329586	56469084	31530	-0.0042
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	18	56472900	56489901	15	-1.0493
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	18	56492141	77109240	11017	-0.0252
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	19	284018	10589422	3445	0.0479
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	19	10593042	10595886	4	-3.2337
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	19	10598724	58878226	20415	0.0185
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	20	455764	62219837	37170	-3e-04
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	21	15347621	47678774	20366	-0.58
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	17423930	17783945	202	0.028
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	17787836	17788525	2	-1.7109
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	17788722	46550267	14533	0.0302
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46551586	46654035	58	0.6282
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46654323	46657954	15	0.3043
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46660586	46662602	5	0.9367
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46662653	46671071	13	0.5451
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46671121	46691903	19	0.9183
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46695318	46740316	32	0.6141
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	22	46744685	49331012	1980	-0.0023
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	3157107	12050612	2760	0.0209
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	12051094	12052692	3	-1.1556
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	12055896	12690481	588	0.0174
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	12691332	12691621	2	-1.2979
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	12691674	29483137	8419	0.016
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	29485887	29485916	2	-1.4747
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	29487155	96241582	24964	0.0013
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	96244686	96244712	2	1.4643
SEPOY_p_TCGAb57_SNP_1N_GenomeWideSNP_6_A02_667394	X	96245406	154905589	27045	-0.0041
