Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	1	3208470	190686683	93118	0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	1	190687251	190687520	2	-2.3836
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	1	190687850	245880329	34945	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	474222	2520448	619	-1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	2520880	2523485	3	-1.4974
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	2524898	31733248	18635	0.0059
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	31743450	31744470	2	-1.8199
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	31745075	53713183	12041	0.0077
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	53714415	53714931	3	-1.701
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	53715065	161125881	52786	0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	161127759	161176722	40	0.5559
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	161177125	228656718	38347	0.0098
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	228658832	228708624	35	0.7282
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	228713975	242124735	7719	0.0075
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	3	526235	61101861	33239	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	3	61102245	61105940	4	-1.3176
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	3	61106220	199023074	72266	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	1043934	43119209	25615	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	43119687	43119919	3	-1.4945
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	43123183	78031091	16055	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	78034569	78087112	28	0.4122
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	78087364	127816781	28037	-0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	127817290	127883758	51	-1.1922
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	127884091	189836143	32011	0.0035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	5	967233	149058124	80380	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	5	149058316	149059415	2	-2.9889
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	5	149060864	180293075	19215	0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	959281	25145651	16781	0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	25145837	25204273	49	0.4152
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	25205429	75424006	23989	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75432323	75438354	5	0.4792
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75438561	75456323	8	0.1324
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75459183	75479619	15	0.5489
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75489581	170745844	54801	-8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	7	671810	131511955	66672	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	7	131512128	131540514	20	0.5398
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	7	131541396	158077879	13988	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	8	607667	145304484	80824	0.0028
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	9	779932	140058573	67411	0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	405240	23640791	16102	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	23641198	23690109	27	0.4034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	23696322	118453727	53448	0.0042
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	118455190	118521846	49	0.3607
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	118527087	135075077	10572	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	446120	31156447	19460	0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	31163933	31210621	27	0.6843
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	31210795	74489669	19397	0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	74491913	74533886	30	0.5257
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	74534324	89615125	8925	-0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	89615131	89681899	26	0.4499
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	89682187	133647740	28738	0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	12	760163	131671419	73311	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	13	18348806	114005560	56063	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	14	19571208	105059083	49000	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	15	21238778	52738614	16456	-0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	15	52738743	52738890	2	-2.9531
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	15	52739369	99701830	27690	-6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	16	593460	59978763	23369	-0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	16	59989006	60037673	20	0.5703
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	16	60039418	87907437	17170	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	17	933971	78510305	36737	0.0052
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	18	319586	75210228	42292	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	19	235018	39237000	13384	0.0061
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	19	39240611	39283500	38	0.5051
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	19	39283595	63570038	10411	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	20	403764	48672691	28263	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	20	48674774	48740152	35	0.4022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	20	48744602	61690281	8713	0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	21	14269492	46503202	20417	-0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	22	15803930	47717016	16833	0.005
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	3167107	106998688	41449	0.0026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	107003468	107073202	24	0.4827
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	107076877	133889351	12743	0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	133891285	133962586	53	0.505
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	133964093	154558783	8965	0.0057
