Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	1	3218610	192420060	93174	0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	1	192420628	192420897	2	-2.3836
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	1	192421227	247813706	34943	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	484222	2541441	619	-1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	2541873	2544478	3	-1.4974
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	2545891	31879744	18633	0.0059
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	31889946	31890966	2	-1.8199
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	31891571	53859679	12039	0.0077
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	53860911	53861427	3	-1.701
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	53861561	161417635	52779	0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	161419513	161468476	40	0.5559
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	161468879	228948474	38349	0.0099
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	228950588	229000380	35	0.7282
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	2	229005731	242476062	7720	0.0076
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	3	2212571	197538677	105504	0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	1053934	43424452	25615	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	43424930	43425162	3	-1.4945
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	43428426	77812067	16052	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	77815545	77868088	28	0.4122
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	77868340	127597331	28043	-0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	127597840	127664308	51	-1.1922
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	4	127664641	188762240	32012	0.0035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	5	914233	149077931	80381	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	5	149078123	149079222	2	-2.9889
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	5	149080671	180360469	19214	0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	1014281	25037672	16782	0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	25037858	25096294	49	0.4152
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	25097450	75367286	23991	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75375603	75381634	5	0.4792
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75381841	75399603	8	0.1324
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75402463	75422899	15	0.5489
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	6	75432861	170903919	54805	-8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	7	705284	131861415	66675	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	7	131861588	131889974	20	0.5398
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	7	131890856	158385118	13986	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	8	617667	145232496	80832	0.0028
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	9	789932	140938752	67423	0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	415240	23600785	16102	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	23601192	23650103	27	0.4034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	23656316	118463737	53446	0.0042
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	118465200	118531856	49	0.3607
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	10	118537097	135225087	10572	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	456120	31199871	19457	0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	31207357	31254045	27	0.6843
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	31254219	74812021	19397	0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	74814265	74856238	30	0.5257
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	74856676	89975477	8924	-0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	89975483	90042251	26	0.4499
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	11	90042539	134142530	28732	0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	12	889902	133161346	73306	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	13	19450806	114987458	56059	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	14	20501368	105988038	48998	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	15	23687685	54951322	16458	-0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	15	54951451	54951598	2	-2.9531
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	15	54952077	101884307	27687	-6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	16	653459	61421262	23369	-0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	16	61431505	61480172	20	0.5703
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	16	61481917	89379936	17106	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	17	987221	80917016	36737	0.0052
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	18	329586	77109240	42289	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	19	284018	34545160	13384	0.0061
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	19	34548771	34591660	38	0.5051
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	19	34591755	58878226	10411	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	20	455764	49239284	28266	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	20	49241367	49306745	35	0.4022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	20	49311195	62219837	8713	0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	21	15347621	47678774	20416	-0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	22	17423930	49331012	16832	0.005
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	3157107	107112032	41464	0.0026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	107116812	107186546	24	0.4827
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	107190221	134061685	12751	0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	134063619	134134920	53	0.505
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A03_1348310	X	134136427	154905589	8959	0.0055
