Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	1	3208470	245880329	127959	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	474222	38528424	22295	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	38529269	38530365	6	-1.5619
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	38531205	72173078	19549	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	72174361	72176471	3	-1.5643
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	72176725	124732805	23079	-0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	124735764	124736629	4	-1.2772
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	2	124738622	242124735	65210	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	3	526235	13557576	6734	0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	3	13557898	13558528	2	-1.5534
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	3	13560313	39848950	15597	-0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	3	39849051	39849458	2	-1.7572
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	3	39859824	199023074	83114	-1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	4	1043934	176936356	95863	4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	4	176937360	176937459	2	-2.4243
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	4	176937563	189836143	5868	-0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	5	967233	180293075	99556	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	6	959281	2617556	1236	-0.0036
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	6	2621598	2622952	3	-1.3307
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	6	2623277	25055784	15458	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	6	25059178	25059497	4	-1.4071
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	6	25059788	170745844	78895	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	671810	24125473	12153	-0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	24126304	24126318	2	-1.7515
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	24126680	35500331	7380	2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	35502036	35503030	5	-1.1882
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	35503066	45443712	6039	0.0065
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	45452102	45452749	2	-1.61
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	45459336	153585288	52411	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	153587587	153588296	2	-1.6071
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	7	153588630	158077879	2643	-0.0039
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	8	607667	1846655	591	-0.0128
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	8	1847344	1847582	2	-1.7734
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	8	1849752	145304484	80181	-3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	9	779932	140058573	67375	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	10	405240	90787725	52608	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	10	90797168	90803918	7	-1.4465
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	10	90808135	135075077	27520	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	11	446120	133647740	76526	-3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	12	760163	129768504	72511	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	12	129768943	129769282	2	-2.2372
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	12	129772302	131671419	773	-0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	13	18348806	106056305	51224	0.003
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	13	106057487	106057525	2	-2.0644
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	13	106057532	114005560	4803	-0.0113
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	14	19571208	105059083	48961	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	15	21238778	99701830	44101	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	16	593460	54529483	20055	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	16	54530528	54552344	17	-1.1881
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	16	54553559	87907437	20436	-0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	17	933971	78510305	36703	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	18	319586	75210228	42265	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	19	235018	17048907	6491	-0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	19	17050468	17050786	2	-1.6266
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	19	17054518	63570038	17315	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	20	403764	5679199	3026	-0.0066
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	20	5680675	5685039	3	-1.9309
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	20	5691282	61690281	33948	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	21	14269492	16979504	1647	-0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	21	16979517	16979537	2	-1.8465
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	21	16983163	46503202	18745	0.0039
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	22	15803930	30289486	5812	0.0091
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	22	30291149	30291713	3	-1.4354
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	22	30298262	44356113	8599	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	22	44362079	44366652	5	-1.0622
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	22	44367572	47717016	2393	0.0097
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A05_1348284	X	3167107	154558783	63005	0.0063
