Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	3218610	43208561	21026	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	43209539	43209566	2	-1.6168
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	43211594	112706213	41515	0.0042
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	112706218	112740149	47	-1.1611
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	112741855	238855281	60364	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	238855638	238856094	3	-1.515
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	238862449	245110573	4051	-2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	245112503	245112520	2	-1.6865
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	1	245116120	247813706	1159	0.0157
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	2	484222	242476062	130290	0.0059
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	3	2212571	86261525	48576	0.0054
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	3	86265202	86265815	2	-2.6563
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	3	86270162	106796344	8927	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	3	106797042	106797100	2	1.6035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	3	106798418	197538677	48033	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	4	1053934	188762240	101862	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	5	914233	26017664	14862	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	5	26020106	26020115	2	-1.8046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	5	26020426	180360469	84816	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	6	1014281	170903919	95701	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	7	705284	43904773	24774	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	7	43907932	43908215	2	-4.2431
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	7	43910682	158385118	55949	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	617667	78592504	42355	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	78592664	78592809	2	-1.5236
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	78593877	128440928	28386	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	128441535	128441852	3	-1.457
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	128442469	131391018	1943	0.0179
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	131391274	131391874	2	-1.5915
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	131392573	139143072	5757	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	139143419	139143911	2	-3.0514
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	8	139144914	145232496	2421	0.0058
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	9	789932	106377538	46140	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	9	106378103	106389458	6	-1.1146
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	9	106393223	136126177	19470	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	9	136128546	136132873	4	-1.6617
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	9	136133699	140938752	1842	-0.0122
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	10	415240	29959675	20353	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	10	29964124	29967646	6	-1.0492
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	10	29968324	135225087	59893	-3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	11	456120	10436036	5329	0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	11	10437339	10438353	3	-1.6628
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	11	10440344	12945249	2100	0.004
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	11	12946165	12946203	3	-1.5145
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	11	12946702	134142530	69188	0.0021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	12	889902	21563144	11723	0.0043
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	12	21567605	21585614	8	-1.0112
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	12	21588168	133161346	61627	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	13	19450806	27045939	3907	-0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	13	27046220	27054459	7	-1.1511
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	13	27059020	114987458	52182	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	14	20501368	105988038	49019	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	15	23687685	88809335	36257	0.0054
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	15	88811174	88811330	2	-2.3573
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	15	88814132	101884307	7908	0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	16	653459	79039329	33704	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	16	79041551	79041655	3	1.2487
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	16	79042553	89379936	6787	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	17	987221	80917016	36749	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	18	329586	77109240	42305	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	19	284018	2904289	575	0.0121
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	19	2905076	2924341	15	0.7602
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	19	2924898	58878226	23248	0.0066
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	20	455764	62219837	37033	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	21	15347621	43554527	18531	-0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	21	43557659	43559782	2	1.4903
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	21	43559902	47678774	1890	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	22	17423930	49331012	16839	-0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_A12_1348248	X	3157107	154905589	63153	-0.0013
