Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	1	3218610	247813706	128102	-0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	2	484222	152731422	79133	0.0055
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	2	152736890	152906460	108	-1.0684
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	2	152909599	184060669	18474	0.0056
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	2	184063820	184065928	2	-2.1904
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	2	184067343	242476062	32535	0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	3	2212571	197538677	105492	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	4	1053934	18121353	10426	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	4	18122819	18128558	3	-1.7463
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	4	18128641	188762240	91388	-1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	5	914233	180360469	99618	0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	6	1014281	170903919	95653	9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	7	705284	91186549	45544	2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	7	91187426	91187821	2	-2.0786
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	7	91188628	158385118	35143	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	617667	10416017	4200	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	10416422	10417352	2	-1.7143
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	10419303	28306510	12124	0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	28307911	28308594	2	-2.0062
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	28309119	107621736	41790	0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	107622476	107623158	2	-2.3295
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	8	107623453	145232496	22727	9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	9	789932	140938752	67429	-0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	10	415240	45715314	27689	-8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	10	45715548	45717192	2	-1.7773
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	10	45717523	73707800	14484	0.0058
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	10	73708100	73708266	2	-2.6281
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	10	73709360	135225087	38033	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	11	456120	134142530	76580	-2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	12	889902	9991096	4832	-0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	12	9991160	9991371	2	-1.9491
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	12	9991838	73798810	34155	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	12	73801875	73818508	7	-1.0816
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	12	73823088	133161346	34326	0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	19450806	21503790	703	0.01
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	21504396	21514509	7	-0.8918
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	21522017	91711545	40363	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	91712963	91713229	2	-2.3161
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	91716139	107258304	10185	-0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	107259486	107259524	2	-1.8347
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	13	107259531	114987458	4802	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	14	20501368	105988038	48999	-6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	15	23687685	97637472	41799	-0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	15	97637490	97643334	2	-2.014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	15	97644074	101330960	1980	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	15	101332973	101333010	2	-1.8672
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	15	101356515	101884307	355	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	16	653459	89379936	40483	-0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	17	987221	60695044	26471	-0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	17	60695400	60695522	2	-1.8704
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	17	60695995	80917016	10256	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	18	329586	77109240	42292	0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	19	284018	58878226	23823	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	20	455764	62219837	37003	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	21	15347621	47678774	20418	-0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	22	17423930	33847076	7174	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	22	33847286	33848010	2	-1.7851
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	22	33853022	49331012	9659	0.0024
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	3157107	30320705	12097	-0.0042
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	30321035	30321814	3	-3.3732
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	30321976	40732422	4674	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	40732509	40741699	3	2.6178
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	40741751	41830179	542	-0.0127
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	41833859	41843719	4	-2.2759
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	41843836	50132515	3419	-0.006
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	50134811	50135327	2	-3.7037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	50136788	97603698	16362	-0.012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	97605844	97608294	2	3.9133
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	97608981	143358145	20959	-0.0042
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	143358447	143359466	3	-3.7903
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B05_1348320	X	143361187	154905589	5042	-0.0092
