Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	1	3208470	245880329	128035	0.005
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	2	474222	33673496	19876	0.0131
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	2	33677804	33678427	2	-3.0382
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	2	33682478	242124735	110336	0.0087
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	3	526235	199023074	105475	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	4	1043934	40337032	24136	0.0036
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	4	40342068	40381225	22	0.8213
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	4	40381991	189836143	77647	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	5	967233	180293075	99635	0.0052
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	6	959281	170745844	95635	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	7	671810	99281855	50148	0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	7	99284982	99287122	2	-3.0675
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	7	99287654	158077879	30546	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	8	607667	145304484	80805	0.0036
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	9	779932	132713318	63964	0.0051
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	9	132714235	132714639	2	-3.0917
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	9	132715336	138037993	2918	-0.0084
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	9	138038075	138047537	2	-2.1127
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	9	138053225	140058573	513	-0.0127
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	10	405240	61494945	35001	0.0039
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	10	61497959	61503654	5	-1.662
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	10	61503785	123730367	38442	0.0051
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	10	123730719	123731874	2	-3.0649
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	10	123732122	135075077	6746	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	11	446120	133647740	76573	0.003
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	12	760163	131671419	73316	0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	13	18348806	114005560	56068	0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	14	19571208	64276189	24461	0.0106
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	14	64276792	64276795	2	-3.0645
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	14	64276941	105059083	24540	0.01
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	15	21238778	99701830	44140	0.0064
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	16	593460	8266761	3451	0.007
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	16	8266844	8268519	2	-2.7564
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	16	8268632	87907437	37079	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	17	933971	78510305	36723	-2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	18	319586	75210228	42276	0.0076
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	19	235018	63570038	23824	0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	20	403764	61690281	36993	0.0075
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	21	14269492	46503202	20411	0.0096
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	22	15803930	47717016	16821	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	X	3167107	20714571	7058	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	X	20717920	20718934	2	-2.7071
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B06_1348400	X	20719691	154558783	56182	0.0051
