Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	1	3208470	245880329	128105	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	2	474222	242124735	130287	0.0072
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	3	526235	199023074	105539	0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	4	1043934	109710013	59500	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	4	109711881	109739714	3	-1.8148
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	4	109749774	176936356	36459	-0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	4	176937360	176937459	2	-2.3056
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	4	176937563	189836143	5877	0.0041
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	5	967233	180293075	99651	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	6	959281	170745844	95677	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	7	671810	158077879	80716	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	8	607667	145304484	80865	0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	9	779932	140058573	67435	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	10	405240	67699965	38998	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	10	67704564	67719018	14	-1.2517
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	10	68221426	122862267	33686	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	10	122864338	122865436	5	-1.145
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	10	122865458	135075077	7540	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	11	446120	36717887	23247	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	11	36719509	36720320	2	-1.9316
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	11	36720389	133647740	53369	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	12	760163	73465688	39720	4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	12	73472179	73472581	3	-1.5374
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	12	73473967	102549123	17610	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	12	102550905	102550991	2	-1.8297
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	12	102552774	131671419	16013	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	13	18348806	114005560	56100	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	14	19571208	105059083	49022	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	15	21238778	99701830	44163	2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	16	593460	87907437	40559	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	17	933971	11240668	5452	-0.0057
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	17	11245823	11306045	60	0.6139
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	17	11306340	78510305	31229	-0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	18	319586	75210228	42307	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	19	235018	63570038	23832	9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	20	403764	61690281	37021	0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	21	14269492	46503202	20418	-1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	22	15803930	43747195	13985	-0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	22	43752650	43772055	14	-1.05
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	22	43776309	47717016	2834	0
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	X	3167107	144690925	58993	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	X	144691503	144691650	2	-5.346
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	X	144692111	148200558	2111	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	X	148203547	148204006	2	-4.5865
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B09_1348398	X	148212042	154558783	2030	0.007
