Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	1	3208470	245880329	128007	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	2	474222	208208578	109814	0.0054
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	2	208209190	208211796	2	-2.364
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	2	208212838	242124735	20375	0.0067
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	3	526235	199023074	105471	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	4	1043934	119600870	65063	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	4	119603318	119628745	6	-1.1846
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	4	119629830	150483278	16439	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	4	150492322	150492638	2	-2.0457
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	4	150506056	189836143	20277	-0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	5	967233	98511220	52042	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	5	99590989	99653756	39	-1.2522
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	5	99655038	111964823	6500	-0.0068
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	5	111969737	111971451	3	-1.329
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	5	111972645	180293075	41004	2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	6	959281	170745844	95621	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	7	671810	158077879	80663	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	8	607667	145304484	80817	-3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	9	779932	2471455	1057	0.015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	9	2471651	2471683	2	1.4594
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	9	2473527	20935372	11597	0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	9	20935466	20940004	3	-1.625
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	9	20940911	140058573	54736	-2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	10	405240	73377806	42165	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	10	73378106	73379727	4	-1.1999
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	10	73379996	103843240	17985	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	10	103847119	103851336	4	-1.1143
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	10	103852409	135075077	20028	-0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	11	446120	100179991	54522	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	11	100182343	100183819	3	-1.6307
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	11	100186601	133647740	22047	2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	12	760163	16256164	8641	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	12	16259970	16283812	19	-1.1901
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	12	16288678	131671419	64645	4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	13	18348806	114005560	56056	-0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	14	19571208	105059083	48987	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	15	21238778	99701830	44131	9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	16	593460	87907437	40537	-0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	17	933971	78510305	36722	0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	18	319586	75210228	42275	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	19	235018	63570038	23823	-0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	20	403764	61690281	37001	0.0026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	21	14269492	29097499	9320	0.0083
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	21	29099755	29100148	2	-1.4634
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	21	29100231	46503202	11081	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	22	15803930	47717016	16821	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	X	3167107	22706375	8188	0.0091
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	X	22706827	22708593	2	-5.0714
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	X	22712672	110346483	34925	0.0075
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	X	110346611	110358765	6	-2.3637
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B10_1348272	X	110359091	154558783	19987	0.0031
