Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	1	3208470	245880329	128099	-0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	474222	23318649	14598	0.0082
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	23320371	23327062	7	-1.0769
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	23329291	85185956	34065	0.0053
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	85185971	85186917	2	-2.0769
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	85187487	135813272	21216	0.0092
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	135815880	135818276	2	-2.5501
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	135819235	216332938	44764	0.0056
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	216333222	216335229	2	-1.8614
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	216336178	242124735	15620	0.0108
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	3	526235	199023074	105525	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	1043934	3302277	917	0.0163
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	3309480	3325650	7	-1.4485
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	3332641	85298270	45110	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	85301166	85301318	3	-1.5546
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	85309824	157624707	39548	-0.0021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	157626456	157627865	5	-1.1931
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	157634850	189836143	16255	0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	967233	141995377	75843	-1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	141998044	142000197	7	-0.998
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	142002286	150970438	5848	-0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	150972866	150973044	2	-1.7005
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	150973521	180293075	17950	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	959281	33959151	19585	-2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	33959724	33959945	2	-2.9676
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	33961697	141611179	58778	0
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	141613222	141613291	3	-2.0522
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	141620049	147324532	3377	-0.0026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	147330257	147331068	4	-1.9064
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	147331609	148048837	450	-0.0035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	148049830	148050573	2	-2.1485
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	148056240	170745844	13474	0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	671810	120424169	60740	0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	120431303	120432023	3	-1.4026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	120432585	134347827	7785	0.0053
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	134348928	134348951	2	-1.5391
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	134352414	144378757	5151	9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	144378831	144378906	2	1.6661
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	144381475	152484518	4242	0.0108
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	152486778	152486798	2	-1.6855
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	152491884	158077879	2794	0.0116
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	8	607667	145304484	80868	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	9	779932	1746845	409	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	9	1747039	1747501	2	-1.9237
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	9	1747693	140058573	67027	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	10	405240	135075077	80232	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	11	446120	133647740	76613	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	12	760163	121705573	68758	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	12	121707028	121708021	3	1.3322
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	12	121715049	131671419	4582	0.009
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	13	18348806	47807202	18465	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	13	47809265	47809391	6	-0.9703
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	13	47815440	114005560	37631	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	14	19571208	105059083	49024	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	21238778	53808513	17120	-0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	53809436	53811467	2	-1.6306
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	53811668	68307131	9283	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	68311561	68312433	3	-1.8113
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	68316251	99701830	17766	0
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	16	593460	31468191	13650	-0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	16	31473017	31473707	2	-1.7455
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	16	31475035	87907437	26897	-0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	17	933971	48184546	20908	-0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	17	48190536	48191484	3	-1.6987
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	17	48191994	78510305	15826	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	18	319586	75210228	42307	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	19	235018	63570038	23834	0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	20	403764	61690281	37022	0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	21	14269492	46503202	20418	0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	22	15803930	47717016	16832	-6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	3167107	14211274	4251	-0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	14211582	14211585	2	-2.011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	14214618	32553509	9196	-0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32554637	32555271	2	-2.3147
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32561286	32616061	34	0.0465
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32616162	32624285	9	-0.6622
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32628002	51309854	7949	0.0068
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	51316163	51343345	25	0.5677
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	51485163	55128175	984	0.017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	55129149	55132741	2	-2.4351
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	55139508	154558783	40804	0.0034
