Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	1	3218610	247813706	128152	-0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	484222	23465144	14596	0.0082
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	23466866	23473557	7	-1.0769
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	23475786	85332445	34059	0.0053
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	85332460	85333406	2	-2.0769
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	85333976	136096802	21214	0.0092
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	136099410	136101806	2	-2.5501
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	136102765	216624693	44765	0.0057
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	216624977	216626984	2	-1.8614
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	2	216627933	242476062	15621	0.0108
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	3	2212571	197538677	105520	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	1053934	3332479	917	0.0163
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	3339682	3355852	7	-1.4485
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	4	3362843	188762240	100925	-9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	914233	142015193	75843	0
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	142017860	142020013	7	-0.998
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	142022102	150990245	5849	-0.0024
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	150992673	150992851	2	-1.7005
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	5	150993328	180360469	17949	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	1014281	33851173	19586	-2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	33851746	33851967	2	-2.9676
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	33853719	141569486	58783	0
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	141571529	141571598	3	-2.0522
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	141578356	147282839	3378	-0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	147288564	147289375	4	-1.9064
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	147289916	148007144	450	-0.0035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	148008137	148008880	2	-2.1485
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	6	148014547	170903919	13474	0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	705284	120636933	60743	0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	120644067	120644787	3	-1.4026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	120645349	134697287	7785	0.0053
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	134698388	134698411	2	-1.5391
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	134701874	144747824	5149	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	144747898	144747973	2	1.6661
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	144750542	152853585	4242	0.0108
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	152855845	152855865	2	-1.6855
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	7	152860951	158385118	2794	0.0116
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	8	617667	145232496	80876	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	9	789932	1756845	409	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	9	1757039	1757501	2	-1.9237
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	9	1757693	140938752	67039	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	10	415240	135225087	80230	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	11	456120	134142530	76603	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	12	889902	123139620	68754	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	12	123141075	123142068	3	1.3322
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	12	123149096	133161346	4581	0.009
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	13	19450806	48909201	18463	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	13	48911264	48911390	6	-0.9703
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	13	48917439	114987458	37629	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	14	20501368	105988038	49022	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	23687685	56021221	17122	-0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	56022144	56024175	2	-1.6306
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	56024376	70520077	9281	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	70524507	70525379	3	-1.8113
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	15	70529197	101884307	17765	0
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	16	653459	31560690	13650	-0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	16	31565516	31566206	2	-1.7455
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	16	31567534	89379936	26834	-0.003
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	17	987221	50829547	20907	-0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	17	50835537	50836485	3	-1.6987
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	17	50836995	80917016	15827	0.0021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	18	329586	77109240	42304	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	19	284018	58878226	23834	0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	20	455764	62219837	37025	0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	21	15347621	47678774	20417	0.0023
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	22	17423930	49331012	16831	-6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	3157107	14301353	4253	-0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	14301661	14301664	2	-2.011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	14304697	32643588	9195	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32644716	32645350	2	-2.3147
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32651365	32706140	34	0.0465
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32706241	32714364	9	-0.6622
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	32718081	51293114	7951	0.0067
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	51299423	51326605	25	0.5677
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	51468423	55111450	983	0.0174
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	55112424	55116016	2	-2.4351
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B11_1348270	X	55122783	154905589	40819	0.0035
