Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	1	3208470	245880329	127784	0.0068
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	2	474222	242124735	129971	0.0091
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	3	526235	199023074	105304	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	4	1043934	189836143	101659	-0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	5	967233	146753479	78768	0.0054
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	5	146755570	146755668	2	-2.2664
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	5	146755692	180293075	20664	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	6	959281	170745844	95492	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	671810	2618165	527	-0.0266
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	2619156	2620318	2	-1.9913
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	2624742	38963966	21464	-0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	38965374	38981756	9	-1.0965
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	38984133	158077879	58540	-0.0054
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	8	607667	145304484	80666	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	779932	13921696	7086	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	13921821	13922020	3	-1.9135
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	13922328	97401026	34292	-0.0059
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	97401916	97402020	2	-2.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	97402254	140058573	25869	-0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	10	405240	100279961	58148	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	10	100283494	100283690	2	-2.2824
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	10	100284507	135075077	21857	-0.0087
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	446120	70175958	36606	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	70179275	70179648	3	-1.813
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	70180368	76761638	3425	-0.0075
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	76762353	76769222	3	-1.6423
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	76771226	122651945	28963	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	122656103	122656849	2	-2.1101
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	122656995	133647740	7415	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	12	760163	131671419	73161	0.0041
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	13	18348806	50618475	19411	-0.0039
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	13	50619573	50622625	2	-2.2522
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	13	50622788	114005560	36523	-0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	14	19571208	105059083	48907	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	15	21238778	83108169	33972	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	15	83108291	83110654	3	-2.1897
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	15	83111035	99701830	10068	-0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	16	593460	83866300	38235	-0.0095
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	16	83866391	83868581	2	-2.9775
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	16	83869379	87907437	2180	-0.0187
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	17	933971	78510305	36633	-0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	18	319586	53853310	30834	-0.0081
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	18	53854736	53872050	11	-0.6387
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	18	53873966	75210228	11356	-0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	19	235018	63570038	23744	-0.0176
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	20	403764	61690281	36881	-0.0118
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	21	14269492	46503202	20368	-0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	22	15803930	26943359	4001	-0.0232
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	22	26944609	26998394	40	-1.1869
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	22	27001242	47717016	12720	-0.017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	X	3167107	87456684	33750	0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	X	87458438	87465240	5	-1.2999
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	X	87472406	154558783	29412	0.0038
