Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	1	3218610	247813706	127838	0.0068
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	2	484222	242476062	129963	0.0091
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	3	2212571	197538677	105299	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	4	1053934	188762240	101663	-0.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	5	914233	146773286	78769	0.0054
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	5	146775377	146775475	2	-2.2664
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	5	146775499	180360469	20663	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	6	1014281	170903919	95499	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	705284	2651639	527	-0.0266
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	2652630	2653792	2	-1.9913
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	2658216	38997441	21465	-0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	38998849	39015231	9	-1.0965
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	7	39017608	158385118	58540	-0.0055
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	8	617667	145232496	80674	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	789932	13931696	7087	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	13931821	13932020	3	-1.9135
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	13932328	98361205	34299	-0.0059
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	98362095	98362199	2	-2.0038
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	9	98362433	140938752	25873	-0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	10	415240	100289971	58146	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	10	100293504	100293700	2	-2.2824
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	10	100294517	135225087	21857	-0.0087
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	456120	70498310	36602	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	70501627	70502000	3	-1.813
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	70502720	123146735	32385	-0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	123150893	123151639	2	-2.1101
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	11	123151785	134142530	7415	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	12	889902	133161346	73156	0.004
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	13	19450806	51720474	19409	-0.0039
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	13	51721572	51724624	2	-2.2522
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	13	51724787	114987458	36521	-0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	14	20501368	105988038	48905	0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	15	23687685	85307165	33972	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	15	85307287	85309650	3	-2.1897
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	15	85310031	101884307	10067	-0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	16	653459	85308799	38171	-0.0095
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	16	85308890	85311080	2	-2.9775
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	16	85311878	89379936	2180	-0.0187
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	17	987221	80917016	36633	-0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	18	329586	55702312	30833	-0.0081
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	18	55703738	55721052	11	-0.6387
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	18	55722968	77109240	11354	-0.0044
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	19	284018	58878226	23744	-0.0176
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	20	455764	62219837	36884	-0.0117
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	21	15347621	47678774	20367	-0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	22	17423930	28613359	4001	-0.0232
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	22	28614609	28668394	40	-1.1869
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	22	28671242	49331012	12719	-0.017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	X	3157107	87570028	33760	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	X	87571782	87578584	5	-1.2999
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_B12_1348396	X	87585750	154905589	29419	0.0038
