Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	1	3218610	247813706	127923	0.0047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	2	484222	149639289	76996	0.0103
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	2	149641890	149644977	2	-2.4262
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	2	149644991	185426314	21187	0.0144
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	2	185428809	185428946	2	-3.1924
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	2	185429026	242476062	31854	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	3	2212571	197538677	105360	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	1053934	80731390	43412	-0.0057
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	80731543	80731763	2	-2.4325
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	80733001	128125357	26471	-0.0043
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	128127456	128127662	2	-3.4138
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	128128381	133095004	2223	-0.0206
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	133095069	133095941	3	-1.9844
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	4	133096943	188762240	29577	-0.0085
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	5	914233	180360469	99494	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	6	1014281	170903919	95483	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	7	705284	158385118	80574	-0.0033
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	8	617667	145232496	80716	-0.0024
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	9	789932	25047346	15262	-0.008
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	9	25049702	25056825	12	-1.2689
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	9	25058337	128786923	46043	-0.004
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	9	128787316	128797551	4	-1.8233
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	9	128798584	140938752	6001	-0.021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	10	415240	135225087	80064	-0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	11	456120	75996842	39458	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	11	75997610	75999754	3	-2.0935
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	11	76001198	134142530	37009	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	12	889902	73798810	38943	0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	12	73801875	73818508	7	-1.4135
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	12	73823088	133161346	34255	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	13	19450806	114987458	55965	-0.0074
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	14	20501368	105988038	48923	7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	15	23687685	65619042	23267	-0.0083
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	15	65626219	65627970	2	-3.3216
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	15	65632171	101884307	20802	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	16	653459	89379936	40388	-0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	17	987221	80917016	36658	-0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	18	329586	77109240	42198	-0.0055
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	19	284018	23387840	8505	-0.0066
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	19	23393286	23393877	2	-2.8656
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	19	23394336	46480294	10224	-0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	19	46490569	46491266	2	-2.0573
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	19	46494631	58878226	5034	-0.0162
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	20	455764	11379765	6841	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	20	11379842	11381828	2	-2.3087
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	20	11381966	62219837	30076	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	21	15347621	30136552	9272	-0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	21	30136573	30136868	2	-2.5648
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	21	30137674	39968086	6499	0.0024
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	21	39968348	39968482	2	-2.0506
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	21	39968534	47678774	4599	-0.021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	22	17423930	49331012	16798	-0.015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C06_1348268	X	3157107	154905589	63202	-3e-04
