Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	1	3208470	245880329	128081	0.0012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	2	474222	186006469	98705	0.0087
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	2	186597505	186656139	38	-1.0755
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	2	186661171	242124735	31532	0.0072
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	3	526235	199023074	105533	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	4	1043934	5006345	1707	-0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	4	5015076	5491094	339	-1.1853
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	4	5498378	189836143	99789	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	5	967233	70757942	36792	0.0022
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	5	70761115	70807449	23	0.6726
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	5	70815955	180293075	62832	0.0024
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	6	959281	170745844	95673	0.0028
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	7	671810	158077879	80704	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	8	607667	145304484	80844	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	9	779932	126153065	60515	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	9	126155923	126159099	4	-1.2948
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	9	126159177	140058573	6914	-8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	10	405240	134086438	79978	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	10	134087415	134189293	46	0.6685
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	10	134189313	135075077	200	-0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	11	446120	133647740	76610	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	12	760163	131671419	73338	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	13	18348806	114005560	56095	9e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	14	19571208	105059083	49009	0.003
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	15	21238778	99701830	44151	1e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	16	593460	87907437	40558	0.002
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	17	933971	78510305	36739	-7e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	18	319586	75210228	42294	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	19	235018	34192429	9897	-0.0031
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	19	34193380	34199964	5	-1.1743
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	19	34200329	63570038	13926	-0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	20	403764	61690281	37015	6e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	21	14269492	46503202	20415	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	22	15803930	47717016	16836	-3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_C12_1348322	X	3167107	154558783	63257	0.0023
