Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	1	3208470	245880329	128014	0.0018
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	2	474222	242124735	130190	0.0063
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	3	526235	199023074	105474	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	4	1043934	125678855	68447	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	4	125679801	125682385	3	-1.6266
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	4	125682475	189836143	33328	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	5	967233	180293075	99580	0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	6	959281	170745844	95634	-4e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	7	671810	52678234	30669	0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	7	52681529	52681711	2	-2.7277
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	7	52683009	158077879	50001	0.0035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	8	607667	32288979	18714	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	8	32289082	32291504	3	-1.5947
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	8	32291552	73327552	20409	0.0024
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	8	73338466	73341235	2	-2.0387
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	8	73344943	145304484	41679	0.0041
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	9	779932	31183235	18443	5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	9	31184999	31223318	36	-0.9817
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	9	31224838	140058573	48901	0.0053
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	10	405240	135075077	80163	0.004
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	11	446120	133647740	76550	0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	12	760163	131671419	73307	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	13	18348806	65682033	26652	0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	13	65689725	65696611	4	-1.6
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	13	65696874	114005560	29398	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	14	19571208	105059083	48991	0.0042
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	15	21238778	99701830	44130	0.0028
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	16	593460	87907437	40533	0.0075
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	17	933971	78510305	36731	0.0019
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	18	319586	7926914	3939	-0.0036
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	18	7926938	7930117	3	-1.6423
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	18	7933219	75210228	38336	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	19	235018	63570038	23819	0.0045
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	20	403764	61690281	36999	0.0039
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	21	14269492	46503202	20408	-0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	22	15803930	47717016	16824	0.0035
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	3167107	9219978	1237	-0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	9220045	9221210	2	-4.1923
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	9223909	45733366	17789	0.0037
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	45733868	45733952	2	-3.9885
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	45734054	56784955	3974	0.0066
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	56785581	56785931	2	-4.3735
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D01_1348260	X	56789803	154558783	40041	0.0092
