Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	1	3208470	245880329	128127	0.0025
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	2	474222	242124735	130296	0.0078
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	3	526235	192863324	103125	0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	3	192866568	192866743	6	-1.0078
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	3	192869174	199023074	2424	0.0071
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	4	1043934	189836143	101852	2e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	5	967233	180293075	99666	0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	6	959281	170745844	95690	3e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	7	671810	158077879	80712	0.0016
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	8	607667	145304484	80875	0.0032
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	9	779932	140058573	67442	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	10	405240	36691674	24709	-0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	10	36694469	36702672	8	-1.2107
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	10	36703030	135075077	55530	0.0026
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	11	446120	13503597	7940	0.005
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	11	13504193	13506766	5	-1.1628
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	11	13506796	133647740	68693	0.003
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	12	760163	1872593	259	0.013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	12	1872623	1890306	6	-1.1001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	12	1891656	131671419	73078	0.001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	13	18348806	114005560	56110	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	14	19571208	73490229	29803	-0.0021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	14	73493530	73493535	2	-1.9663
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	14	73494809	83025560	6141	-0.0014
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	14	83028664	83028852	3	-1.5823
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	14	83032482	105059083	13068	-0.0029
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	15	21238778	99701830	44169	0.0015
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	16	593460	87907437	40565	0.0027
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	933971	3622129	1162	-0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	3623829	3626527	2	-1.8432
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	3627436	56704257	24678	-5e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	56706403	56710944	6	-1.0438
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	56712372	62319602	2852	0.0065
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	62320041	62321449	2	-1.7502
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	17	62321528	78510305	8044	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	18	319586	75210228	42311	0.0021
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	19	235018	41941506	14853	-0.0046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	19	41946966	41958001	10	-1.0634
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	19	41961977	43922743	944	0.0017
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	19	43931017	43940911	3	-1.6811
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	19	43941544	63570038	8024	-0.0078
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	20	403764	16026803	9722	0.0048
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	20	16027006	16032944	3	-1.3807
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	20	16036321	61690281	27305	0.0011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	21	14269492	46503202	20418	0.0013
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	22	15803930	47717016	16842	0.0055
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	X	3167107	31601337	12794	8e-04
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	X	31605489	31605940	2	2.1181
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	X	31606324	103433283	27163	0.0034
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	X	103433406	103433443	2	-2.0628
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_D03_1348390	X	103437744	154558783	23311	0.003
