Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	1	3208470	7055632	2395	-0.6714
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	1	7063417	7219987	103	-0.0343
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	1	7221145	8367729	677	-0.6965
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	1	8370779	8767786	183	-3.4857
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	1	8773115	120328884	63671	-0.6611
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	1	142745296	245880329	60841	0.3517
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	474222	179258563	95012	0.3161
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	179262112	181447281	1386	0.85
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	181456107	209393278	14203	0.309
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	209394842	209394875	2	-2.4129
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	209395751	218010258	5264	0.3123
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	218013197	218212381	148	-0.4678
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	218213007	220793974	1414	0.3481
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	220794127	221069545	208	-1.0185
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	221072460	239962639	11436	0.3267
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	239964907	241064720	724	-0.4857
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	241066010	241122111	62	0.3091
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	241122329	241138751	2	-0.9664
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	2	241140118	242124735	430	0.3491
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	3	526235	71700893	40693	-0.0796
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	3	71701392	71735578	25	-2.2918
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	3	71736080	176344111	53385	-0.0853
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	3	176345056	176429687	85	-0.6794
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	3	176434954	199023074	11316	-0.0736
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	1043934	60640552	33032	-0.0907
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	60641999	62570260	1083	-1.6316
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	62572552	103821764	22179	-0.0922
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	103823755	104030207	88	-1.5445
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	104036562	115635359	6582	-0.0887
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	115636214	115636780	2	-2.7194
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	115637451	122648320	3880	-0.09
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	122648828	122655711	2	-1.6958
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	122659559	156959554	18267	-0.0933
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	156959921	156966575	9	0.6401
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	156972624	163578415	3820	-0.0796
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	163578676	164347376	438	-0.6933
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	164354511	180599139	8444	-0.0985
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	180599842	180616351	12	-0.7629
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	180620904	181762125	784	-0.0973
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	182315890	182734729	343	-0.7332
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	182793548	182874584	71	-5.3504
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	182874619	183323695	384	-1.9892
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	4	183324324	189836143	2375	-0.0923
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	967233	1073354	50	1.7651
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	1340540	1341661	5	0.6964
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	1341694	1362467	6	1.6477
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	1366667	5021029	2550	-0.7556
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	5021204	5021548	3	-2.5724
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	5021755	28138192	13306	-0.7138
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	28139645	28462406	171	1.5232
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	28469272	29457026	511	1.0113
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	29461586	29463769	2	2.1537
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	29465948	31688363	1495	0.3279
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	31691027	31862821	156	0.911
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	31863182	33150395	828	1.3801
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	33157599	33321174	83	0.9578
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	33326273	41442230	4677	0.3607
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	41444605	41458069	12	-0.6349
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	41461001	168938723	69488	0.3474
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	168941638	169286044	284	-0.7351
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	169334347	169427951	96	0.4047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	169430216	169608211	162	1
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	5	169609835	180293075	5723	0.3609
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	6	959281	170745844	95385	-0.6945
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	671810	7586589	2639	0.3428
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	7591110	7861693	249	-0.6502
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	7867768	65168482	30827	0.3497
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	65170444	65364523	60	-0.0546
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	65383866	82248994	7858	0.3242
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	82250211	82324790	41	0.985
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	7	82330195	158077879	39052	0.3422
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	607667	13054646	5394	0.3373
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	13057200	13114544	23	-0.6817
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	13118507	130836976	66947	0.3449
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	130841164	130841310	3	-0.925
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	130841806	137735910	5113	0.364
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	137953445	137986640	15	-0.7849
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	8	137990265	145304484	3373	0.3614
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	9	779932	21970470	13303	-0.6743
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	9	21976218	22078260	98	-3.8253
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	9	22079599	99600397	29204	-0.682
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	9	99602525	135647272	23146	0.3574
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	9	135647427	135647431	2	-1.2126
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	9	135655129	140058573	1545	0.4062
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	10	405240	135075077	80244	0.3481
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	446120	10393915	5315	-0.6698
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	10394077	10394929	2	-6.7696
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	10396920	70111952	31212	-0.6834
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	70116801	70117487	2	-5.2079
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	70118307	70740256	409	-0.7483
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	70740315	70741167	2	-3.1046
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	70741403	80204183	5391	-0.6694
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	80204529	80204687	3	-3.5168
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	80206663	128177684	30691	-0.6828
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	128177718	128321516	121	-5.1582
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	11	128321860	133647740	3202	-0.6961
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	12	760163	131671419	73356	0.3425
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	13	18348806	38546018	12562	0.3374
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	13	38546519	38547040	2	-1.2271
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	13	38573022	97654702	33067	0.3427
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	13	97662996	97768897	112	-0.7413
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	13	97772864	114005560	10360	0.3479
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	19571208	41003007	11453	-0.0815
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	41009477	41009657	2	-1.7538
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	41010233	50553924	4240	-0.0819
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	50557855	72783440	13746	-0.6739
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	72783861	72790915	9	-1.8596
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	72790998	75776714	1641	-0.6748
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	75798908	98733600	14996	-0.0831
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	98734737	98737440	4	-1.6899
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	14	98739758	105059083	2868	-0.0586
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	15	21238778	83137732	34071	-0.0691
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	15	83137810	83137949	3	-1.2933
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	15	83138257	84944427	992	-0.0699
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	15	84946745	84947152	9	-1.0583
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	15	84947372	99701830	9067	-0.077
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	16	593460	63066124	25265	0.3463
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	16	63066166	63066207	2	-2.8648
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	16	63066555	69415622	3348	0.3462
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	16	69417185	69757550	62	0.6834
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	16	69762695	87907437	11889	0.3568
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	17	933971	78510305	36735	-0.0723
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	18	319586	75210228	42297	-0.0826
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	19	235018	63570038	23833	0.3337
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	20	403764	49226240	28628	0.3577
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	20	49226588	49284871	41	-0.5659
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	20	49287469	61690281	8354	0.3574
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	21	14269492	46503202	20415	-0.0784
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	22	15803930	27719992	4406	-0.6779
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	22	27725969	27864621	118	-4.6562
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	22	27865810	47717016	12232	-0.6734
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	3167107	39799677	16395	0.1012
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	39802344	39829880	17	0.7087
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	39837893	63975902	7931	0.0933
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	63981373	64122796	56	-0.9047
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	64127159	96939392	12503	0.0854
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	96939452	96944209	3	-1.2001
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	96947143	138595763	19610	0.0936
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	138908653	143408399	1823	-0.9635
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	143412920	145574553	1368	0.1148
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	145575189	151591885	3158	-0.9397
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	151594005	152559486	97	0.0819
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_E12_1348354	X	152570061	154558783	296	-0.895
