Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	3218610	21127937	9858	0.2261
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	21129867	21132575	3	1.4051
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	21133099	50859921	15174	0.2321
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	50868684	50873339	7	-0.6467
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	50875951	97395412	28902	0.2919
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	97397047	97419122	14	-0.5861
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	97421239	228059308	61635	0.2781
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	228064796	228066753	2	-1.4079
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	1	228068109	247813706	12578	0.2812
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	484222	2417386	505	0.2593
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	2417647	2424495	3	-0.9268
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	2425955	70233127	40082	0.2674
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	70236033	70238098	4	-0.7356
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	70239733	98977754	10399	0.2589
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	98989062	99746458	383	-0.5941
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	99769210	101274450	902	0.2344
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	101274733	130528038	15275	-0.5711
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	130530407	131631493	213	0.2284
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	131632241	133881534	748	-0.5491
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	133883392	134486122	300	0.2967
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	134489924	135021072	436	-0.5933
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	135022328	135985101	566	0.2616
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	135996398	137217609	640	-0.5676
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	2	137220611	242476062	59804	0.2786
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	3	2212571	14842986	7555	-0.5494
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	3	14846588	14849172	6	-2.5723
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	3	14855141	197538677	97811	-0.5363
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	4	1053934	119527331	65159	0.2901
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	4	119527652	188762240	36647	-0.5352
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	5	914233	17877417	10802	0.31
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	5	17880459	17880863	3	1.3175
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	5	17881818	17890785	5	-0.2353
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	5	17891044	18688976	466	0.2711
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	5	18690205	18690813	3	-0.2564
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	5	18691012	180360469	88399	0.3011
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	6	1014281	134828853	74441	0.2849
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	6	134833039	134901441	27	0.7474
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	6	134901942	170903919	21232	0.2856
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	705284	7839377	2795	0.2323
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	7839445	7841423	2	-1.5308
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	7841561	7860036	18	0.3194
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	7860044	7860242	5	-0.3614
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	7860424	105666258	50236	0.2989
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	105666270	105785260	90	0.7951
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	105787598	152593168	24582	0.2967
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	152594375	152608306	14	-0.7223
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	7	152613363	158385118	2991	0.2839
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	8	617667	145232496	80740	-0.5439
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	9	789932	35450632	21005	0.282
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	9	35466064	35743278	133	0.7592
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	9	35751950	112091505	29081	0.2726
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	9	112097391	112133083	25	0.7787
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	9	112134277	140938752	17217	0.2555
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	415240	73764509	42230	0.2734
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	73768805	74300766	248	0.7191
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	74302168	79394239	2934	0.2582
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	79399946	79432480	26	0.7884
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	79433097	89295371	6129	0.2932
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	89295958	89487272	146	0.7606
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	89492753	133997031	28236	0.2682
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	134002148	134466163	164	0.7498
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	10	134475794	135225087	138	0.2288
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	456120	1944202	398	-0.6272
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	1953827	1954565	2	1.6589
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	1956104	20605243	12283	-0.5384
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	20605665	20605983	2	-3.4239
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	20606457	72861888	25088	-0.5362
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	72862568	73007436	96	0.2577
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	11	73014855	134142530	38583	-0.5287
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	12	889902	25587675	14315	-0.5504
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	12	25590600	125112323	55347	0.2711
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	12	125114391	125177752	52	0.843
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	12	125178819	133161346	3627	0.2872
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	19450806	19618304	111	-0.5266
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	19622143	19623713	3	-2.3504
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	19625104	78839985	33683	-0.5336
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	78847455	78850211	3	-2.0659
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	78852091	84922750	3503	-0.5075
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	84923705	84925572	2	-4.1608
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	13	84925596	114987458	18696	-0.537
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	14	20501368	100999283	46901	0.2793
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	14	101014155	101099502	38	0.8286
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	14	101106245	105988038	2085	0.2227
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	15	23687685	101884307	44171	0.2565
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	16	653459	7442494	2763	0.2277
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	16	7445794	7730630	330	-0.6041
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	16	7731389	53293757	14883	0.2474
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	16	53298189	70750240	10564	-0.5584
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	16	70753196	89379936	11940	0.2763
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	987221	1203617	25	-0.6198
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	1204864	1206042	2	-2.6854
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	1209747	17354293	8138	-0.6172
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	17355554	17355589	2	-3.0513
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	17356013	52044455	13255	-0.6071
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	52047319	52047763	4	-2.639
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	52050486	55767923	2675	-0.5629
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	55773848	55907117	123	0.1905
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	55908536	64254585	4010	-0.5909
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	64258857	64258912	2	-2.4448
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	64259329	73709553	5518	-0.5864
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	73713996	73774243	13	0.5621
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	17	73781820	80917016	2914	-0.6485
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	18	329586	77109240	42234	-0.5569
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	19	284018	538487	48	0.6665
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	19	547973	37634544	15000	0.1975
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	19	37652573	37673777	12	-0.6611
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	19	37685190	58878226	8779	0.1836
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	455764	6922046	3956	-0.5858
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	6922676	6923536	5	-2.0275
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	6925667	14007188	4593	-0.5234
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	14007703	14194647	97	-2.8238
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	14201921	17432333	2257	-0.518
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	17433079	17434286	3	-2.7862
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	17435262	26195868	5759	-0.5508
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	26195886	34795153	2361	0.2068
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	34795372	35355620	184	1.0919
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	20	35362636	62219837	17783	0.2646
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	21	15347621	47678774	20425	0.2477
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	22	17423930	28694210	4076	0.238
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	22	28694407	28695034	2	-1.2939
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	22	28704890	42776968	8229	0.2119
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	22	42982798	43270747	148	0.6658
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	22	43279626	49331012	4384	0.2359
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	X	3157107	13872002	3954	-0.0136
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	X	13872281	13872468	2	-3.9464
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	X	13874299	151843349	58756	0.004
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	X	152699719	152713153	11	1.1972
AQUAE_p_TCGA_112_304_b2_N_GenomeWideSNP_6_F09_1348288	X	152713672	154905589	380	-0.0357
