Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	51598	1631963	230	-0.0715
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	1637190	1659016	11	0.6673
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	1662463	7274915	3283	-0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	7275561	7296514	11	-1.2337
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	7300110	16703407	5166	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	16704450	16890117	69	-0.3368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	16890217	16954999	19	-0.8452
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	16955178	17150527	85	0.3452
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	17155012	72541504	33992	4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	72541524	72583721	44	-1.2709
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	72583736	110023250	23666	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	110025907	110029038	15	-0.5098
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	110034497	110041701	17	-1.3151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	1	110044476	247191011	75622	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	2784	34534998	24066	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	34536794	34590561	49	-0.4997
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	34590667	52608385	13018	0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	52612257	52635046	33	-0.5156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	52641453	75731320	14878	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	75734647	75734785	3	1.3293
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	75735336	79171754	2278	0.0197
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	79172068	79197326	15	0.6482
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	79198200	85282301	3817	0.0061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	85282371	85286781	2	-2.3077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	85287610	106241154	8608	0.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	106246527	106251789	12	-1.7414
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	106253687	107807168	991	0.0125
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	107813401	107847339	2	-1.8785
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	107858520	120654502	6952	0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	120654964	120659295	6	-1.0668
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	120663408	130510326	6367	0.005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	130510353	130565707	12	-0.768
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	130565774	142579300	7275	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	142579630	142583087	2	-1.6635
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	142583968	154598055	7195	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	154604221	154604728	2	-1.6769
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	154608469	176967088	13535	0.0044
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	176975422	176980779	2	1.7005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	176983384	188827168	7286	0.0145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	188828173	188835175	4	-1.9292
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	2	188837303	242738129	33333	0.007
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	35345	46768381	33142	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	46776821	46824593	40	-0.7527
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	46834483	57026918	5461	0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	57027747	57034410	12	0.645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	57036384	75651239	14000	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	75655239	75669495	6	-1.942
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	75677871	84781874	4993	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	84782374	84784826	15	-0.617
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	84784851	89489715	2718	0.0062
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	89489728	89502071	36	-0.7905
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	89502611	194356398	61463	0.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	194356501	194365597	22	-0.7441
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	194369129	196765671	1476	-0.0142
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	196766953	196932593	30	-0.7427
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	3	196941179	199380515	1192	-0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	2281	4173729	1705	-0.0334
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	4185847	4203661	5	-1.0158
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	4210964	9038409	3509	-0.0048
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	9039367	9046108	11	-0.8449
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	9055145	9837881	564	-0.0333
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	9837900	9840596	24	-2.1772
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	9843312	9844366	7	-0.9023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	9845240	34462895	16958	0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	34463350	34500578	36	-0.6878
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	34501120	60002628	14031	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	60007544	60013040	5	1.148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	60014130	68900494	5386	0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	68900647	68943659	10	1.067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	68964800	68970737	5	-0.9235
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	68977394	69234339	85	0.5538
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	69378740	70130236	308	0.0018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	70134706	70264023	67	0.3996
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	70266388	70424305	113	0.0371
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	70424450	70425368	2	-3.1027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	70426477	116385317	27805	0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	116385553	116399819	27	-0.4922
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	116400004	122501423	3704	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	122501918	122510581	29	-0.7857
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	122510972	173659097	30943	0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	173661522	173665218	7	1.0872
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	4	173677707	191261904	11861	-1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	68532	4006610	2872	-0.0306
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	4011678	4022857	9	-1.177
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	4026807	46306865	27866	0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	46307687	46309259	6	-2.2706
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	46313969	57357403	5070	-0.0018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	57361784	57369290	32	1.8764
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	57374114	103879120	26800	0.0069
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	103888272	103888503	4	1.3241
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	103888948	150157901	29747	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	150158433	150204288	19	0.5055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	150209963	150408777	136	0.006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	150412260	150412346	2	-1.4073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	150412639	151495579	821	0.008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	151495663	151495912	4	-1.1982
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	151496021	155407683	2667	0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	155409350	155427828	15	-0.6551
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	155427831	180311316	16593	-0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	180311494	180365870	20	-2.209
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	5	180375006	180722926	169	-0.0624
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	94661	223146	112	-0.0645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	224695	326149	89	-0.467
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	327559	26840385	20027	-0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	26845011	26866009	16	-0.9913
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	26870366	26876548	9	-0.3739
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	26881042	29853705	1356	4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	29853740	29853773	2	-1.9669
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	29853863	29952351	87	-0.0584
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	29956867	29982688	12	0.7306
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	29982787	31394255	663	-0.0391
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	31394284	31404430	10	1.0726
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	31417903	32609277	521	-0.0606
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	32616454	32681749	17	0.9622
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	32681992	32732282	27	-0.404
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	32732569	32734596	5	1.5638
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	32758590	53609717	13342	-0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	53610597	53611418	3	-1.3542
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	53611652	66456266	5416	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	66456270	66465641	25	-0.5174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	66466071	74648953	5430	0.0083
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	74649185	74658138	9	-2.3371
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	74660283	77493251	1766	0.0028
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	77496587	77509408	20	-0.6924
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	77509476	103841522	16557	0.0054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	103844669	103844982	6	-1.2108
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	103845007	103858257	14	-0.1803
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	103858570	103868754	26	-1.2208
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	6	103872163	170892930	44117	-0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	52911	38277248	27375	0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	38277623	38323848	95	-0.2886
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	38324752	54347867	11010	-0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	54353999	54354011	6	-2.5043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	54360982	64231500	3136	-0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	64231776	64233133	5	-1.2909
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	64274563	109221013	25609	-3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	109221021	109224993	16	0.6223
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	109225008	125832210	10037	0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	125832718	125833851	12	1.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	125834112	129219048	1996	-6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	129227891	129234535	3	-1.5453
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	129234975	149454249	12924	-0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	149456114	149482501	11	0.7172
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	149486268	153249881	2309	-0.012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	153249995	153250390	2	-3.2005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	153250881	154020828	510	-0.0252
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	154024104	154030546	4	-1.2448
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	7	154031763	158819765	3233	-0.0136
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	21254	3774468	3427	-0.0205
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	3774491	3777514	23	-0.83
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	3778626	8091754	4598	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	8092670	8109713	3	-2.0338
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	8124554	12690760	3427	-0.0218
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	12693099	12696897	4	-1.4118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	12697904	15445549	2629	0.0153
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	15447431	15457818	9	-1.0434
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	15467641	25031417	7668	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	25031487	25040250	22	-0.9351
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	25047021	39349816	9003	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	39354760	39506122	59	-0.6462
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	39507456	65011190	13637	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	65011451	65011562	4	1.5932
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	65011625	115703730	30137	0.0021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	115703829	115710745	30	-0.4776
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	8	115710761	146268959	21025	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	36587	11685067	11025	0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	11685108	11685757	2	1.8342
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	11685785	24494125	10188	0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	24494668	24507682	18	-0.9603
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	24509684	44569219	10159	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	44667855	44777523	34	-1.467
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	44780914	134939411	45852	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	134940716	134947261	7	1.0048
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	9	134955483	140211215	2409	-0.0206
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	62759	17863977	14843	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	17876598	18104574	12	-1.1737
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	18115027	18176754	6	0.6577
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	18190767	31286516	9387	-0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	31291340	31291732	9	-2.345
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	31291744	31291785	2	-0.8281
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	10	31291828	135356694	66583	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	188510	4212705	1789	-0.0109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	4212876	4309557	28	-0.7368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	4315385	4926819	659	0.027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	4926853	4933069	32	-0.4751
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	4933110	5743981	786	0.0046
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	5744656	5766037	34	0.4819
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	5768936	20609346	10972	-0.0046
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	20611815	20611836	2	-1.5791
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	20616206	37089996	11912	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	37090049	37090644	6	0.9857
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	37090734	49715563	7606	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	49716131	49716632	5	-1.0178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	49717264	55132599	758	0.0115
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	55132812	55198894	43	-0.4849
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	11	55200787	134449982	52297	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	20703	7886054	5356	-0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	7895692	8022225	61	0.5675
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	8025936	30126848	15106	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	30130534	30134956	23	-1.368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	30134989	31797939	1247	0.0131
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	31798541	31801175	4	-1.1159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	31808487	33185927	1016	0.0149
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	33192673	33198641	27	-0.6583
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	33199627	130583452	61354	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	130588160	130588177	2	-3.0184
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	12	130588353	132288262	677	-0.0302
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	17924949	19019459	564	-0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	19021895	19021910	2	-2.3639
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	19022501	36968370	12962	-6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	36969135	36982757	17	-0.5505
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	36986330	37950811	699	0.0071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	37955572	37956056	2	-1.7339
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	37963057	71374989	20831	0.009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	71375556	71378557	4	-1.9298
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	13	71378606	114126499	29071	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	18072124	19045977	72	0.0531
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	19080913	19493212	118	0.699
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	19494766	21462988	1355	-0.0265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	21463199	21463385	3	1.4039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	21463439	40680246	12248	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	40680440	40727099	14	-0.6189
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	40739852	46766010	3521	0.0218
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	46777086	46786033	7	-0.9901
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	46786733	69083732	14266	-5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	69087800	69098300	13	-0.6051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	69102579	97036022	18653	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	97037702	97038740	2	-1.8913
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	97038913	105531947	4708	-0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	105550720	105550986	2	1.7237
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	105553173	105945406	180	5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	105950876	105989694	52	-0.567
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	105993576	106215504	124	0.0473
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	106216317	106249648	28	-0.434
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	14	106250541	106356482	71	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	15	18276341	18841469	103	0.0349
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	15	18841576	19900281	243	0.3408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	15	19901922	32466069	7441	-5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	15	32481928	32643110	78	-0.7123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	15	32645302	100286563	44054	-4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	777	54354095	27266	-0.0098
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	54355723	54356280	3	2.5697
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	54361849	54366967	7	0.7746
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	54367522	79561808	17565	-0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	79562880	79562903	2	-4.2981
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	79564259	82178574	2785	-0.0123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	82178594	82187087	3	-1.6846
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	82187236	84666315	2144	-0.0487
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	84666736	84671754	4	-1.3803
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	16	84672330	88815036	2599	-0.0226
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	526	38787791	22046	-0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	38794116	38795447	3	-2.9529
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	38799230	40907666	1040	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	40910685	41051160	26	-0.4577
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	41059597	41709662	453	-0.0238
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	41717786	42140165	55	0.6101
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	17	42140863	78643088	21540	-0.0028
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	1543	6559495	4663	-0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	6560026	6563349	2	-1.8023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	6564508	36511872	18095	0.0048
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	36512068	36519387	34	0.4578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	36523496	56068828	13403	0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	56068921	56069331	8	0.7984
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	18	56073091	76116029	14483	0.0091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	41910	20385941	8962	-0.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	20385983	20508229	73	-0.7504
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	20512721	40355614	7578	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	40355683	40355883	5	-1.057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	40357887	40477167	112	0.0241
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	40480322	40481525	4	0.8152
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	40484878	40541061	47	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	40541149	40553688	24	-0.6871
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	40558584	45758301	2654	-0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	45760771	45776703	6	1.0831
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	45777854	58210326	6401	-0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	58210559	58246052	23	0.9676
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	19	58246131	63789666	3410	-0.0211
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	20	9305	9312	7	-0.4519
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	20	9548	1500457	1174	-0.017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	20	1500503	1530207	58	-0.4975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	20	1538257	1541893	5	1.8303
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	20	1545946	62426597	41133	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	21	9758742	9965425	35	-0.5295
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	21	9975295	46921385	24303	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	22	14432528	14488143	12	0.6751
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	22	14492001	14766665	37	0.0296
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	22	14774605	14805145	12	0.7666
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	22	14805217	20798619	3234	-0.0399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	22	20803918	20804613	6	-1.0885
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	22	20811498	49581321	20198	-0.0116
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	108477	88699278	46808	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	88700630	88703924	2	-2.2465
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	88708939	112967166	12773	0.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	112970786	113151743	119	0.5958
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	113153685	113153820	2	-1.033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	113156176	113483261	130	0.5837
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	X	113483453	154835548	24582	-0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	2710438	3045595	151	-2.6891
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	3065268	6161425	688	-2.3173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	6167901	6404503	106	-3.7963
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	6416305	8412852	1087	-2.8302
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	8413707	10369564	555	-3.2321
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	10384614	14099670	950	-2.7592
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	14099736	14103917	3	-7.6945
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	14104283	17679836	1880	-2.781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	17688729	17688934	3	-7.7695
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	17691665	18084284	196	-2.8302
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	18085938	19547873	704	-3.4614
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	19551832	22391165	1085	-2.8555
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	22392047	25040317	569	-3.3409
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	25040616	25211715	29	-4.5688
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	25212554	26681504	342	-3.3036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	26687080	26731407	14	-4.8535
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	26731471	26833326	43	-3.3232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D09_1362248	Y	26847504	57427647	183	-2.5749
