Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	51598	218569	18	-0.6229
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	218592	12764515	6498	-0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	12768450	13081670	42	0.557
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	13100972	25455928	7580	0.0054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	25465715	25519573	28	-0.5842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	25534088	31110004	2887	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	31113023	31117811	4	-1.2483
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	31118372	72541504	25828	0.0099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	72541524	72583736	45	-1.4678
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	72584492	73444493	532	0.0094
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	73447552	73464831	10	-0.6942
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	73466243	81409474	5038	0.0157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	81411761	81412297	3	-1.3855
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	81413008	105814899	15413	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	105820728	105823898	17	1.2067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	105825578	108567878	1961	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	108570825	108618702	2	-2.8838
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	108630480	110029038	704	2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	110034497	110044476	18	-1.4098
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	110046521	111181543	856	0.0094
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	111184002	111195028	23	0.394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	111195236	114633488	2416	0.0156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	114635149	114635233	2	-1.8676
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	114635325	147509287	5151	0.0159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	147509349	147512654	9	0.871
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	147512899	147513004	4	-0.2877
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	147513018	147603374	21	0.3972
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	147603451	150794433	1472	0.0209
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	150796246	150853218	75	-1.3511
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	150857118	151034091	191	-0.005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	151034106	151035324	16	-0.7435
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	151040529	182430025	21214	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	182431708	182435136	2	-1.8754
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	182435433	192714857	6784	0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	192718034	192721641	2	-1.9836
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	192723639	194998233	1456	0.0171
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	194998709	195007990	13	-1.9304
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	195010759	213558119	12594	0.0087
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	213560092	213565727	7	-1.1755
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	213567654	246815842	23145	0.0113
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	246816183	246894859	40	0.4258
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	1	246898877	247191011	135	0.0169
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	2784	52607972	37131	0.0191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	52607984	52635046	39	-2.5229
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	52641453	146578555	53529	0.0146
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	146580874	146583404	24	-1.7538
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	146594276	151669369	2937	0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	151671237	151671421	4	-1.3215
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	2	151676283	242738129	56086	0.0104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	35345	2095215	1855	0.0432
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	2096865	2097848	4	-2.5068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	2105049	89469791	58521	0.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	89477282	89508571	57	-0.6401
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	89508620	131245549	21963	0.009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	131246388	131288926	52	-1.7767
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	131289614	137501789	4028	0.007
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	137505641	137508116	2	-2.3381
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	137521231	153825517	10054	0.0159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	153829784	153838892	45	-0.7926
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	153839173	156958157	1813	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	156959241	156974871	29	0.6068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	156996103	163995786	4268	0.0179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	163995843	164098609	61	-1.4565
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	164106536	194356398	19146	0.0116
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	194356501	194365597	22	0.7257
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	194369129	196897393	1485	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	196903444	196941532	24	0.7306
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	196941547	196950537	14	-0.4142
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	196959467	199335622	1169	0.0143
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	3	199335868	199380515	8	-0.5523
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	2281	9066075	5240	0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	9070328	9088304	8	0.958
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	9088443	9819488	546	-0.0158
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	9832514	9840596	28	-2.1084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	9843312	9844366	7	-0.9041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	9845240	34466911	16966	0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	34467089	34501120	31	0.4736
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	34506267	64390176	16574	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	64390200	64390412	3	-1.6572
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	64390724	69211554	2946	5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	69219747	69234339	3	-1.155
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	69378740	69990939	226	0.07
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	69993714	69994268	2	-2.042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	69996335	70158099	95	-0.0537
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	70162233	70261488	49	-0.4983
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	70263213	157176082	52214	0.0069
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	157187425	157192655	16	-0.7116
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	157194147	161260188	2421	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	161260718	161286580	30	0.3183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	161286595	162093450	606	0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	162099468	162104573	28	-0.6057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	162104615	171080719	5687	0.016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	171081055	171083616	4	-1.1045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	171084107	172605106	968	-0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	172605921	172614299	12	0.9628
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	172614351	173224503	397	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	173225723	173226108	12	0.4961
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	173232554	173659097	231	0.0159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	173661522	173661604	2	2.114
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	4	173661802	191261904	11869	0.0131
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	68532	786612	324	-0.0246
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	794695	886628	42	0.4205
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	905566	31810982	21715	0.0104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	31811599	31811782	2	-3.0541
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	31815135	46306865	8671	0.012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	46307687	46309259	6	-2.7365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	46313969	55699559	3888	0.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	55699573	55703047	6	-1.0352
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	55703062	68882059	8487	0.006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	68903050	69153891	5	-1.2723
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	69269183	120710272	31038	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	120711240	120731200	13	-1.016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	120733279	180307129	38486	0.0071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	180311316	180349813	15	0.729
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	5	180350220	180722926	175	-0.0379
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	94661	199283	101	-0.0227
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	202353	239837	23	-1.0626
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	247306	326149	78	0.283
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	327559	2549644	1813	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	2549719	2550197	2	-2.1522
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	2553795	19148098	12749	0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	19150160	19152727	6	-0.9525
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	19152742	24430016	3837	0.0021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	24433788	24434264	2	-2.228
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	24436685	26845011	1623	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	26845417	26876548	24	-0.6243
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	26881042	29945051	1435	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	29945166	30045083	57	0.3325
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	30045241	32732282	1204	-0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	32732569	32734596	5	-1.3334
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	32758590	81341357	28541	0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	81341435	81346253	29	-0.8902
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	81351060	103841522	14001	0.0091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	103844669	103868754	46	-1.0467
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	103872163	148048837	27846	0.0044
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	148049830	148050573	2	-2.4365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	148056240	155002574	5095	-4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	155005358	155006206	2	-3.4695
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	155007959	156238297	815	-0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	156239194	156239470	2	-1.449
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	156240073	156491441	209	0.0309
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	156491450	156491833	2	-1.6589
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	156493186	160952555	2904	0.013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	160952709	160953273	5	1.957
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	160988032	161285619	203	0.0211
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	161288258	161288837	3	-1.2914
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	161289796	165040874	2978	0.023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	165043626	165115082	42	0.6256
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	6	165124053	170892930	4017	0.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	52911	70058374	44782	0.017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	70061186	70064077	2	-2.1781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	70066179	125832792	32516	0.0147
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	125832887	125833851	10	-1.2044
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	125834112	133429008	4695	0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	133429177	133440983	29	0.5963
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	133446174	142154515	5694	0.0207
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	142156294	142165614	27	-2.0109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	142165684	143548534	847	0.0174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	143558740	143697880	37	-0.5518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	7	143705862	158819765	9670	0.016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	21254	583041	327	0.0206
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	584944	585875	8	0.6694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	585892	585908	2	4.4079
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	591043	51194564	35128	0.0147
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	51194577	51194940	7	-1.7924
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	51201131	65011190	9035	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	65011451	65011672	6	0.9404
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	65012064	68706587	1871	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	68710013	68712760	30	-0.7712
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	68719382	112360670	26393	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	112363455	112364436	10	1.2923
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	112369457	115700612	1821	0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	115701219	115710745	33	-0.4204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	8	115710761	146268959	21028	0.0048
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	9	36587	140211215	79692	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	62759	24415269	19200	0.0095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	24417680	24418914	12	0.9782
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	24418957	48522382	12967	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	48548797	48567033	4	-1.6515
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	48578525	66976085	12454	0.0124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	66976164	66992932	32	0.4339
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	66995459	70952478	2544	0.018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	70952492	70952848	4	-2.0318
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	70961620	77922857	4235	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	77927067	77927616	2	-1.9855
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	77931273	81434093	2456	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	81439209	81607600	27	-0.7042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	81616642	120163788	25701	0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	120165707	120168297	7	-1.0021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	10	120169349	135356694	11217	0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	188510	4924693	2472	-0.0193
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	4925086	4932965	33	-1.788
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	4933069	18895746	10221	0.0114
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	18896669	18927751	67	0.4035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	18927956	49715563	21033	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	49716131	49717264	6	-1.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	49722737	50258820	283	0.0317
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	50300418	50301966	5	-1.0111
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	50313632	54722184	256	0.0833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	54726437	54738787	5	-0.7385
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	54766051	55119916	203	0.071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	55130608	55225340	69	0.3988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	55230770	59981411	2930	0.0185
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	59985323	59987642	11	-0.7143
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	59988391	85983465	14808	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	85983523	85983702	3	-2.7727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	85992822	101099594	10819	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	101103070	101103174	4	3.1052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	101103422	107153527	4114	0.0198
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	107154020	107176738	16	0.6248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	11	107176811	134449982	19574	0.009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	20703	11402844	7392	0.0084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	11402845	11432296	29	0.8386
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	11434653	22206788	7348	0.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	22206795	22209281	3	-1.7864
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	22209722	33192673	8045	0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	33192693	33199627	27	-0.6088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	33199654	62207110	16265	0.0136
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	62211072	62431572	71	0.636
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	12	62437092	132288262	45729	0.0094
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	17924949	19019459	565	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	19021895	19021910	2	-2.3988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	19022501	51992800	22876	0.0102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	51995985	52003786	3	-1.8743
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	52015880	56649097	2619	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	56656271	56662058	15	0.843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	56662100	56662114	2	-0.5929
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	13	56662164	114126499	38075	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	18072124	18627041	40	-0.0992
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	18632139	19495349	151	-0.3785
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	19495700	43570867	15333	0.0199
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	43571678	43600205	20	-1.0245
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	43602046	105079225	39316	0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105079690	105238532	21	0.4311
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105265522	105601732	131	0.063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105605189	105638145	16	0.7428
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105640508	105786534	66	0.117
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105788401	105798514	8	-0.6
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105799207	105848388	27	0.0631
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105854089	105873098	8	0.9801
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	14	105886988	106356482	308	0.0371
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	15	18276341	18466953	48	-0.0303
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	15	18476969	18522250	5	-1.7012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	15	18524300	18652835	7	-0.593
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	15	18655543	22220838	1366	0.0601
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	15	22225844	22278324	42	-0.6225
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	15	22282088	100286563	50461	0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	777	5547891	2625	-0.0187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	5548090	5548152	2	-2.4577
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	5548338	32031832	17431	0.0212
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	32054387	32783298	123	-0.443
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	32785830	33350064	47	-0.0662
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	33350391	33551523	71	-0.5429
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	33551793	76929109	21474	0.0119
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	76929941	76942239	16	-2.3351
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	16	76942266	88815036	10602	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	526	14978838	9673	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	14984651	14995227	30	-0.9403
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	14999716	18260587	1706	0.015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	18296117	18415371	31	0.4148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	18437031	18876248	170	-0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	18891592	19070824	14	-1.1793
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	19089879	31460645	6711	0.0155
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	31461241	31486016	24	-0.4741
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	31487436	36675234	2555	0.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	36676540	36684057	24	-1.1636
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	36686250	41595011	2567	0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	41595951	41596036	3	-1.3118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	41596051	41756832	68	-0.1576
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	41764423	42107479	44	1.1157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	17	42120174	78643088	21552	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	18	1543	63110303	41105	-0.0223
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	18	63110352	63118245	18	-0.7484
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	18	63118698	76116029	9571	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	41910	8966549	3322	-0.0118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	8967505	8967619	2	-2.2781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	8967624	40541162	13467	0.0096
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	40541333	40553010	18	-0.6884
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	40553489	59414087	9871	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	59422014	59433131	17	0.6749
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	59445152	60973882	761	0.0162
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	60974181	60974879	4	-2.3084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	19	60978105	63789666	1846	0.0144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	20	9305	1509580	1204	-0.0054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	20	1509667	1545946	41	-0.3544
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	20	1546106	58998640	39351	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	20	59002420	59023596	50	0.7241
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	20	59023879	62426597	1742	-0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	21	9758742	10085414	89	0.3148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	21	10085461	46921385	24249	0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	14432528	14482348	8	0.2201
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	14482419	14532285	11	-0.7926
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	14585766	14628706	20	-0.1361
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	14661201	14782930	17	-1.1991
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	14783333	18343666	1892	-0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	18346320	18352283	2	-1.983
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	18356696	18707355	196	-0.086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	18710744	18992706	7	-1.0237
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	19035775	22613016	2425	0.0099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	22613098	22662625	27	0.6036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	22662933	41234550	12785	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	41236945	41264406	19	0.6928
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	41272906	49313898	5947	-0.012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	49319974	49319982	5	-1.3755
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	22	49320620	49581321	146	-0.0981
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	X	108477	154835548	84255	0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D11_1362274	Y	2710438	57427647	8590	-0.9432
