Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	3218610	18965360	8435	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	18976217	18980399	3	-2.4853
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	18980794	65622819	26446	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	65623284	65625752	2	-2.426
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	65626715	83568944	10645	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	83573402	83573869	3	-1.174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	83574440	97541643	8654	0.0082
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	97542236	97542797	3	-1.688
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	97545329	238466832	68854	0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	238470057	238470305	4	-1.4515
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	1	238470945	247813706	5549	-3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	2	484222	242476062	130801	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	3	2212571	197538677	105942	6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	4	1053934	125459405	68810	-0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	4	125460351	125462935	3	-1.7051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	4	125463025	188762240	33557	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	5	914233	180360469	100121	-0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	6	1014281	170903919	96101	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	7	705284	157529893	80742	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	7	157532126	157534105	2	-2.3784
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	7	157535977	157827547	101	0.0134
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	7	157827569	157830676	5	-1.5099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	7	157831175	158385118	192	-0.0374
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	8	617667	134383478	75238	-9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	8	134385205	134387307	3	-1.5683
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	8	134387355	145232496	5937	-0.0095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	9	789932	98441630	41766	0.0048
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	9	98441886	98445060	2	-1.9566
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	9	98445564	135382198	23603	-0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	9	135384477	135385575	2	-2.6733
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	9	135386424	140938752	2346	-0.0111
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	10	415240	119202611	70312	-0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	10	119202688	119204985	4	-1.2944
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	10	119205636	135225087	10193	-0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	11	456120	134142530	76893	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	12	889902	133161346	73671	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	13	19450806	114987458	56401	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	14	20501368	89513281	39384	0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	14	89523166	89525772	2	-2.0167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	14	89525994	105988038	9844	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	15	23687685	101884307	44338	0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	16	653459	11297562	5686	-0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	16	11298850	11299248	2	-2.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	16	11300433	54369458	13191	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	16	54369510	54369523	2	-1.7283
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	16	54372863	89379936	21748	-5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	987221	69081439	31389	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	69082786	69109630	29	-1.232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	69110287	71632960	1881	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	71636808	71637827	2	-1.7384
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	71642057	77748948	2310	-0.0016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	77748961	77753485	4	-1.3406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	17	77755962	80917016	1196	-9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	18	329586	28410007	13944	0.0119
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	18	28410741	28417364	2	1.405
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	18	28422504	36293153	4949	0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	18	36294242	36294734	2	-1.5025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	18	36299276	77109240	23607	0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	19	284018	58878226	23856	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	20	455764	62219837	37121	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	21	15347621	47678774	20495	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	22	17423930	37773095	9940	-0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	22	37774389	37777613	2	-1.9826
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	22	37777668	49331012	6912	-0.0058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	3157107	97100358	36983	0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	97102624	97102651	2	-3.7123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	97103074	101281610	2104	0.0145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	101281724	101282328	3	-2.1468
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	101283273	103382074	859	0.0305
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	103385098	103385817	2	-3.9916
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_E09_1362352	X	103386176	154905589	23380	0.0078
