Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	51598	718471	39	0.5436
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	730720	7078402	3347	-0.0533
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	7078669	7078876	2	-1.9552
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	7081148	14910553	4193	-0.0096
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	14911358	14911998	2	-2.1789
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	14912260	16022502	798	-0.0338
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	16026084	16026512	6	-2.1472
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	16026788	16741950	302	-0.019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	16743865	16878565	45	0.4707
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	16884037	16929044	36	-0.2807
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	16949054	17063449	24	0.2108
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	17067742	17172760	75	-0.5092
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	17174259	25468468	5234	-0.0171
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	25468534	25519533	25	-0.6587
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	25519573	34864261	4950	-0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	34875241	34877078	20	-0.8986
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	34886855	37545355	1407	-0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	37545637	37548885	6	-1.0111
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	37550346	55008179	9706	-0.0028
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	55015907	55033680	8	-1.0938
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	55033797	61890775	5284	-0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	61892397	61892566	2	-1.5824
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	61893152	65200194	2493	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	65201803	65202562	7	-1.0697
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	65207651	72522941	4765	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	72528701	72535958	9	-0.8433
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	72541006	72589609	52	0.3443
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	72591187	94899289	14414	0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	94903266	94906389	13	0.5821
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	94906770	103901443	5573	0.007
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	103904311	103979561	33	0.561
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	104023054	104027091	11	-0.1425
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	104041212	104104926	14	1.3778
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	104105024	105803095	911	0.0105
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	105803129	105823898	22	0.9071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	105825578	109305179	2320	0.0098
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	109306435	109310561	3	-1.7943
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	109310819	111203020	1248	0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	111203215	111205018	4	-1.1481
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	111205080	112491849	1044	0.0138
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	112497488	112498736	22	-0.6646
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	112498764	147291432	6356	0.0054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	147303148	147689241	162	-0.7269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	147695830	149605194	747	5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	149605881	149623957	22	-0.4367
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	149624449	150822151	725	-0.0097
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	150822330	150853218	35	-1.7281
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	150857118	151029291	182	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	151029386	151034127	10	0.9085
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	151034241	163270237	7957	0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	163271074	163271146	2	-1.9104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	163273359	195068695	21570	0.0081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	195079130	195083353	4	-0.9163
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	195089940	197374175	1364	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	197374219	197380463	12	0.682
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	197380861	199600443	1572	0.0163
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	199601418	199602522	2	-2.663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	199606003	221087127	14738	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	221089546	221090227	2	-2.1916
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	221090392	241129663	14296	-0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	241130506	241151280	12	-0.7636
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	1	241151317	247191011	3779	0.006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	2784	4194327	2988	-0.0509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	4194344	4197818	22	0.5379
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	4199696	5529230	1078	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	5529272	5532674	2	-1.7502
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	5532769	8045367	2199	-0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	8046789	8054069	9	-1.1554
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	8057375	20678367	9231	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	20679445	20687093	8	-1.0289
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	20688172	35820889	9408	0.0081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	35821540	35841451	9	0.9127
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	35850977	36696489	764	0.0178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	36701106	36704583	10	-1.193
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	36710351	45153533	6074	0.0109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	45155426	45181807	21	0.6114
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	45184547	52608232	5242	0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	52608369	52635046	35	-0.6277
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	52641453	86791198	21854	0.0083
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	86806581	86807365	2	2.2324
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	2	86823917	242738129	90570	0.0108
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	35345	26586750	19972	0.0154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	26586873	26586889	2	-2.7895
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	26586902	68828854	27684	-3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	68828949	68830103	14	-1.0341
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	68831448	100420474	15910	0.0109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	100427148	100434524	41	-0.5006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	100435082	120202669	12229	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	120213623	120316832	47	1.0581
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	120318623	138515750	10931	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	138515950	138515953	3	1.4149
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	138516112	144768455	3849	-0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	144768490	144768664	4	1.591
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	144769491	164197211	12003	0.0156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	164200421	164208853	3	1.2303
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	164209126	190843448	16537	0.016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	190846372	190853708	13	-0.794
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	190855045	194360596	2484	0.0113
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	194360656	194365563	17	1.1173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	194365582	198148556	2070	-0.0111
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	198150195	198160884	6	-1.3178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	3	198161156	199380515	620	0.0326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	2281	9832514	5775	-0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	9832726	9840596	27	-2.3508
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	9843312	24668088	10844	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	24668132	24668560	3	-1.7406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	24672646	32107354	4809	0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	32110027	32180961	44	0.3172
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	32183075	34455449	1254	0.0141
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	34462895	34506267	39	-0.5748
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	34506308	48195517	8705	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	48197165	48413937	83	0.296
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	48417755	58264513	4182	0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	58264869	58265511	2	-2.3117
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	58267650	61617659	2062	0.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	61619533	61624547	3	-1.2132
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	61628281	63053130	771	0.0133
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	63053521	63055356	3	-1.4222
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	63055457	64375574	721	0.0509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	64376535	64400638	33	0.411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	64404811	68902978	2844	0.021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	68909443	68943659	7	1.3078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	68964800	93781774	14798	0.0046
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	93784637	93788329	3	-1.4397
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	93792822	113544084	11692	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	113548794	113551012	7	-1.3454
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	113551034	116385256	1855	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	116385317	116392684	11	0.794
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	116392718	122501423	3716	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	122501918	122504585	27	-0.8747
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	122510581	127196538	2669	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	127197223	127202513	2	-1.9454
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	127203237	162091053	20894	0.0123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	162091125	162118408	58	0.3936
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	162121904	170324471	5288	0.0169
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	170328365	170328493	2	-1.7157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	4	170333924	191261904	13853	0.0104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	68532	99793	16	0.2473
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	101785	3124990	1995	-0.0733
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	3125852	3125862	2	-2.0988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	3126104	21484976	13692	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	21485033	21488195	6	1.1635
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	21488253	32138488	6575	0.0178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	32142841	32194212	40	1.1622
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	32206044	39810952	5047	0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	39812016	39812292	2	-1.6407
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	39813856	46306865	3328	0.0175
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	46307687	46309259	6	-2.6459
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	46313969	62782902	8633	0.0021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	62783023	62785502	3	-1.238
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	62785604	101505027	21919	0.0117
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	101509395	101511727	2	1.6298
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	101513480	109381500	4809	0.0117
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	109389922	109403748	17	-1.1022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	109404784	151495579	27176	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	151495663	151498544	13	-3.3065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	151500464	155409350	2658	-0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	155409498	155415307	13	-2.2886
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	155427828	180330877	16571	-0.0084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	180331979	180365870	15	-0.672
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	5	180375006	180722926	169	-0.084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	94661	239837	124	-0.0387
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	247306	332532	86	-0.4663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	332659	16194229	12325	-0.0091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	16195213	16195628	2	-2.2009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	16196247	29952013	9129	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	29952351	29957246	6	-0.9638
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	29958175	31388802	665	-0.0674
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	31394255	31403932	8	-1.7911
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	31403966	32562501	508	-0.1201
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	32564661	32682359	35	1.6331
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	32686060	46083757	8471	-0.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	46086102	46086195	3	-2.2674
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	46088516	54039026	5233	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	54039043	54039814	8	-1.1811
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	54043307	65767450	4583	0.0337
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	65768120	65770513	3	-1.4059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	65774105	79019608	8683	0.0237
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	79025784	79091904	113	-0.6881
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	79095953	92077185	8198	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	92077237	92189520	68	0.2639
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	92192767	170377195	51031	0.0021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	170377839	170383000	5	-1.2437
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	6	170383134	170892930	246	-0.03
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	52911	138503	5	0.4074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	139250	16562282	11302	0.0061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	16563176	16563383	3	-2.7016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	16563965	19498740	2541	0.0547
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	19499195	19500562	4	-1.4549
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	19503534	38277248	13482	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	38277623	38353316	108	-0.98
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	38353337	54347867	10977	-0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	54353999	54354011	6	-2.1151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	54360982	56728994	1567	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	56729607	56736308	3	-2.5762
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	56739660	62935623	910	0.0313
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	62939365	62939546	2	-1.9513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	62939877	100809081	21159	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	100811029	100850207	13	-0.5696
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	100850479	117500456	10153	0.006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	117500659	117501273	2	-2.1475
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	117503309	125832210	4952	0.0203
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	125832718	125834115	16	0.931
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	125834116	130998865	2994	-0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	131001324	131003017	2	-1.9649
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	131003348	132216425	965	-0.0317
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	132218795	132220133	2	-2.2383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	132220139	141755499	6222	-0.0154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	141758063	142212783	255	-0.4798
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	142212903	142926974	448	-0.0143
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	142927368	143177236	100	0.3385
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	143177943	149272952	3836	0.0192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	149272966	149300097	10	-0.7176
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	149302981	154020828	2892	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	154024104	154030546	4	-1.9485
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	7	154031763	158819765	3217	-0.0293
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	21254	2570605	1966	-0.0606
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	2577323	2578458	4	-1.3976
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	2582631	5581441	4088	0.0091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	5581540	5591415	26	-0.8793
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	5591708	5591903	3	-2.8552
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	5594496	7241738	1730	-0.0079
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	7241751	7869055	151	0.3505
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	7869464	10293089	1996	-0.0227
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	10293464	10301117	10	-0.9209
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	10304382	12278588	1282	-0.0445
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	12278622	12525049	104	0.3004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	12526350	25028104	10378	0.0096
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	25030360	25040250	27	-0.5588
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	25047021	29359999	3108	-0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	29361227	29361270	2	-2.2363
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	29361674	39349482	5879	0.0105
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	39349816	39507936	62	0.4155
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	39508172	112360670	41899	0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	112363455	112364436	10	1.1946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	8	112369457	146268959	22839	-0.0096
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	36587	11685067	11007	0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	11685108	11685757	2	-1.9017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	11685785	44748482	20378	0.0124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	44760537	44795733	8	-1.4326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	44806024	68285054	249	-0.0463
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	68289368	68812645	45	-0.4768
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	68822858	68934174	12	0.2783
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	68934188	69247488	52	-0.357
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	69247584	105606318	24781	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	105608517	105609111	2	-3.4943
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	105610523	116122632	7980	0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	116127223	116128143	2	1.8149
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	116132850	122006609	4869	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	122008405	122009832	3	-1.9531
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	122010182	137152233	8933	-5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	137153530	137156961	4	-2.3544
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	137157017	137305324	105	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	137307935	137311182	2	-2.0501
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	137311515	137351189	25	-0.1723
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	137353926	137356233	3	1.0702
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	9	137357618	140211215	1109	-0.0525
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	62759	321805	134	-0.0054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	321859	324799	2	-3.3102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	325511	27265997	21030	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	27266104	27268479	11	0.6472
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	27269999	32991743	4091	-0.0138
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	32992343	32995092	30	0.3693
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	32995111	41843467	3790	-0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	41845130	42170865	45	0.3833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	42173057	48391956	2991	-0.0253
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	48457816	48651258	11	0.914
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	48665687	66068684	11780	0.007
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	66069415	66069875	2	-2.2387
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	66072837	82868139	10772	-0.009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	82871310	82886842	12	-1.0151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	82886856	90928653	5685	-0.0028
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	90932947	90933716	7	-1.0759
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	90937793	90940835	9	-0.1357
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	90944409	90947681	7	0.7927
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	90948598	96485841	3446	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	96487886	96536537	18	-0.772
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	96538775	99826281	2101	-0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	99827291	99827392	2	-1.8097
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	99835719	124333941	16835	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	124334099	124336968	5	-1.4182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	10	124346802	135356694	7876	-0.0282
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	188510	4919208	2450	-0.0099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	4919328	4920295	8	1.0409
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	4920679	4924693	12	0.0828
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	4925086	4932251	27	-0.5847
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	4932281	5735099	783	0.0094
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	5739501	5768936	44	0.4472
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	5772762	55119916	31210	0.005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	55130608	55209585	59	-1.8015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	55210152	76453035	11106	2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	76453120	76458623	2	-2.1329
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	76458708	79645161	2132	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	79645196	79645212	2	-2.4309
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	11	79645334	134449982	38960	0.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	20703	8248774	5520	-0.0154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	8253317	8269518	11	0.9736
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	8285095	10233623	1122	-0.0138
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	10234278	10234360	2	-1.2413
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	10234588	13212276	2119	0.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	13215562	13226407	15	-0.6776
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	13227634	34147976	14604	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	34148159	34166673	11	-1.0506
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	34167061	127291442	57821	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	127293068	127305148	23	-0.6515
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	127307672	130686668	2938	-0.0554
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	130698537	130699288	13	-0.9314
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	130708284	132106715	493	-0.0552
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	132106972	132202151	35	0.2975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	12	132202402	132288262	42	-0.1865
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	17924949	18217635	73	-0.013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	18266654	18267592	9	-1.1913
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	18293638	19019459	482	0.0311
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	19021895	19021910	2	-2.3296
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	19022501	36969135	12942	-0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	36970036	36982757	16	-0.6314
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	36986330	37950811	697	8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	37955572	37956056	2	-1.954
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	37963057	54210712	10575	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	54212554	54321315	52	0.3026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	54321436	56649097	1168	0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	56656271	56676381	34	-0.6703
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	56687715	73919898	10882	0.019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	73920004	73920662	2	-1.6568
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	73922614	97325275	14980	0.0028
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	97328125	97336300	8	-1.1491
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	13	97338697	114126499	12119	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	18072124	18871755	61	0.1488
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	18872541	19490079	127	0.7262
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	19492423	21398161	1275	-0.0141
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	21398205	21491517	127	-0.3025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	21492816	21760135	227	-0.8025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	21760263	22023447	195	-1.3167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	22025556	22047089	46	-0.6805
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	22047669	25853753	2482	-0.0103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	25853754	25854753	6	-1.0656
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	25864944	73065527	29650	0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	73070876	73090732	9	-1.7663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	73099653	95804584	15189	6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	95805768	95807483	2	-3.7796
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	95807546	105854089	5657	-0.0214
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	105867070	105892781	11	0.8005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	105896961	105985696	75	0.1675
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	105989093	105989153	5	0.8813
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	14	105989694	106356482	224	0.0323
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	18276341	18801994	80	0.0329
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	18809892	18816444	3	-2.1469
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	18829965	19786318	226	-0.042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	19787133	20224763	113	-0.8513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	20232440	22225980	1003	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	22226226	22269689	38	-0.6027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	22276386	24136706	1344	-0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	24137138	24137974	2	-2.1995
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	24138170	27197954	1612	-0.008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	27199283	27216380	14	-0.6703
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	27217130	41632795	9089	0.0092
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	41672410	41801443	34	-0.8568
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	41801547	74656984	20650	9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	74665417	74682830	23	0.691
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	15	74689234	100286563	17584	-0.0116
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	777	19851864	13468	-0.0308
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	19853151	19873376	28	-1.233
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	19874863	32021193	6516	-0.0234
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	32031832	32151974	14	0.5687
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	32151985	32698770	91	-0.0664
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	32702984	33555980	142	0.3453
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	33562041	53785040	6432	-0.006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	53785115	53788837	6	-1.3855
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	53789241	54354095	516	-0.0385
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	54355723	54356280	3	2.3017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	54361849	54387058	16	0.5645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	54387091	59099466	2931	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	59106318	59128720	11	-0.8538
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	59131895	83852460	18896	-0.0135
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	83852810	83861197	5	-1.0842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	83863604	85328425	1402	-0.0124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	85328570	85329346	3	1.0971
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	85331825	85656817	315	-0.0185
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	85657625	85657807	2	-1.632
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	16	85658326	88815036	1472	-0.0946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	526	2258379	1147	-0.076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	2259104	2259124	4	1.5263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	2263278	9908822	4597	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	9910218	9917362	4	-1.2603
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	9920564	16352112	4596	-0.0048
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	16353067	16355581	7	-0.9154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	16357145	18381685	1049	0.0018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	18382033	18450883	16	0.6472
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	18470413	23803180	2318	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	23805468	23806446	2	-2.8851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	23813398	36676552	7139	-0.0208
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	36676583	36683976	21	-1.3568
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	36684057	41719947	2624	-0.027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	41750187	42120174	49	0.4305
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	42139835	75915416	20361	-0.0087
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	75915454	75930774	9	-1.1826
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	17	75932037	78643088	1146	-0.034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	1543	36514432	22756	0.0084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	36514446	36523496	18	0.656
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	36523810	38294472	1203	0.0161
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	38295419	38314935	33	-0.5757
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	38314993	62057846	16359	0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	62058414	62062569	10	-0.7498
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	62062856	75867858	10093	0.018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	75871310	75872335	2	-2.099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	18	75873645	76116029	148	-0.1047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	19	41910	40541162	16756	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	19	40541333	40553688	22	-2.1122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	19	40558584	59989695	10153	-0.0118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	19	59990392	60015061	14	0.803
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	19	60015853	63789666	2308	-0.0303
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	20	9305	1508802	1198	-0.0247
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	20	1508922	1541849	43	-0.5679
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	20	1541893	62426597	41074	-0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	21	9758742	42022965	21266	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	21	42023353	42023543	2	-2.4993
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	21	42023657	42211469	126	-0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	21	42213774	42215115	3	-2.7516
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	21	42215958	46921385	2907	-0.0468
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	14432528	15037301	94	0.167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	15042742	15063416	2	2.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	15244898	17053357	1115	0.0208
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	17112919	17173947	7	0.8801
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	17185861	22660218	3372	-0.1188
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	22660269	22667307	5	-1.9765
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	22667949	22726814	21	0.7144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	22731529	25453944	2221	-0.0175
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	25454169	25455838	4	-1.1224
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	25456588	28164766	2070	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	28165987	28167286	3	-2.2337
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	28169168	47889947	13529	-0.0113
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	47890260	47890539	2	-3.457
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	22	47890711	49581321	1008	-0.1711
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	108477	4894916	1664	-0.0258
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	4895453	4896033	2	-2.8182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	4896640	75891478	38118	0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	75895243	75901252	3	-1.4563
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	75901756	76270041	238	-0.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	76278683	76295047	2	-2.1016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	76295049	76440325	15	-0.4985
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	76461534	88699278	6738	0.0091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	88700630	88703924	2	-1.5802
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	88708939	113232114	12928	0.0115
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	113232500	113240946	7	-1.2082
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	113243230	115047709	932	-0.0209
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	115051983	115064666	7	-2.3762
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	115070447	116862276	1187	0.0111
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	116862847	116873085	13	0.5859
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	116874597	150043556	20075	-0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	150044592	150046117	2	-2.1039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	X	150047213	154835548	2421	-0.0272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	2710438	6161425	839	-2.5269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	6167901	6404503	106	-3.9571
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	6416305	9224747	1461	-3.1733
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	9227305	9997444	22	-5.0271
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	9997994	10135744	64	-3.0406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	10135914	10241901	42	-4.4181
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	10243865	10385211	56	-3.4654
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	10394949	14099670	949	-2.9272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	14099736	14103917	3	-7.6945
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	14104283	18080026	2077	-3.0208
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	18080874	19547685	705	-3.6312
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	19547873	22268551	1052	-3.0682
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	22268856	24840062	567	-3.6018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	24840296	24867871	10	-1.6056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	24868543	24919963	16	-2.6977
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	24920187	25040616	11	-3.4524
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	25040759	25185903	27	-4.98
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	25211715	25725360	56	-3.7927
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	25776875	26127678	92	-2.9102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	26129939	26589710	177	-3.5578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	26590145	26731407	32	-4.4844
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	26731471	26833326	43	-3.5375
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_F05_1362242	Y	26847504	57427647	183	-2.661
