Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	1	3208470	245880329	128566	-0.0018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	2	474222	208719136	110726	0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	2	208719259	208720112	3	-1.8908
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	2	208724096	242124735	20188	0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	3	526235	199023074	105981	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	4	1043934	2310215	431	-0.0253
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	4	2310992	2312979	2	-2.4522
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	4	2313200	189836143	101965	0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	967233	5852987	3360	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	5853497	5853596	2	-2.7288
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	5855964	90416904	44781	0.005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	90420081	90422907	7	-1.0394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	90424373	177708754	50666	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	177709563	177710261	2	-1.8239
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	177719867	180293075	1340	2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	959281	81640733	44258	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	81641441	81678026	32	-0.9987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	81689141	102417066	11444	0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	102421721	102425340	4	-1.1446
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	102427207	129430224	15350	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	129430579	129445587	16	-0.8787
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	129446781	160881065	20122	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	160882493	160882616	2	-2.0229
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	160884642	170745844	4912	0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	671810	13830534	6032	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	13833932	13838123	10	-0.934
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	13838214	19875111	3191	0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	19875193	19877022	2	-2.3851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	19877472	70658973	27537	0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	70659000	70923736	173	0.6479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	70926897	105167597	16066	-8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	105169792	105171796	8	-1.3074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	105173486	158077879	28050	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	8	607667	3364437	1337	-0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	8	3366448	3372152	13	-1.1461
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	8	3374707	145304484	79859	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	9	779932	140058573	67747	-0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	405240	4918428	2913	0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	4918890	4919940	2	-1.9179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	4920520	121055069	68691	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	121055375	121056524	6	-1.6373
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	121058188	125360350	3375	-1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	125360369	125361128	2	-1.5932
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	125362318	128423689	2073	-0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	128429219	128430956	2	-1.7269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	128435375	135075077	3480	-0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	11	446120	133647740	76968	-9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	760163	53791748	28246	0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	53791761	53794823	6	-1.5486
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	53796992	113923154	36174	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	113923961	113925172	2	-2.0578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	113928294	130131606	8730	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	130132498	130134628	5	-1.2268
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	130135058	131671419	546	-0.0144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	18348806	39016499	13084	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	39016603	39023453	9	-1.509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	39026025	71978437	17112	4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	71983440	71984550	3	-1.3676
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	71985011	90105435	10908	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	90106040	90112281	5	-1.314
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	90112906	114005560	15323	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	14	19571208	105059083	49266	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	15	21238778	88100595	37321	0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	15	88105273	88105435	2	-1.8302
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	15	88105648	99701830	7038	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	16	593460	19365820	8460	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	16	19366435	19368260	3	-1.7871
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	16	19368343	87907437	32252	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	933971	10699995	5006	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	10702925	10707855	8	-0.9603
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	10708074	62429615	23855	-0.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	62430681	62436297	2	-2.1167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	62436985	78510305	7970	-7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	18	319586	75210228	42517	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	235018	22691739	8287	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	22694202	22694550	4	-1.1312
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	22695173	33243081	869	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	33243831	33244253	2	-3.4694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	33244590	63570038	14700	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	20	403764	61690281	37141	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	21	14269492	46503202	20509	8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	22	15803930	47717016	16869	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	3167107	34963811	13936	6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	34964802	34965496	2	-4.1399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	34971009	98256600	23661	0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	98256885	98257412	2	-4.0597
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	98257859	135028531	16828	0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	135028698	135028822	4	-3.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	135029174	144215376	4334	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	144222466	144223980	2	-4.2783
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	144224956	148413637	2515	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	148413773	148415888	2	-3.4752
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	148415940	154558783	1926	-0.0113
