Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	1	3218610	247813706	128620	-0.0018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	2	484222	209010891	110718	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	2	209011014	209011867	3	-1.8908
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	2	209015851	242476062	20188	0.005
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	3	2212571	197538677	105975	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	4	1053934	2340417	431	-0.0253
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	4	2341194	2343181	2	-2.4522
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	4	2343402	188762240	101970	0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	914233	5799987	3361	0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	5800497	5800596	2	-2.7288
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	5802964	90381148	44781	0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	90384325	90387151	7	-1.0394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	90388617	177776148	50665	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	177776957	177777655	2	-1.8239
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	5	177787261	180360469	1340	2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	1014281	81584014	44260	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	81584722	81621307	32	-0.9987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	81632422	102310373	11443	0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	102315028	102318647	4	-1.1446
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	102320514	129388531	15355	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	129388886	129403894	16	-0.8787
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	129405088	160961075	20124	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	160962503	160962626	2	-2.0229
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	6	160964652	170903919	4912	0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	705284	13864009	6033	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	13867407	13871598	10	-0.934
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	13871689	19908586	3192	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	19908668	19910497	2	-2.3851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	19910947	71021037	27535	0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	71021064	71285800	173	0.6479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	71288961	105380361	16067	-8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	105382556	105384560	8	-1.3074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	7	105386250	158385118	28050	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	8	617667	3377029	1338	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	8	3379040	3384744	13	-1.1461
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	8	3387299	145232496	79864	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	9	789932	140938752	67759	-0.0028
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	415240	4928428	2913	0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	4928890	4929940	2	-1.9179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	4930520	121065079	68689	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	121065385	121066534	6	-1.6373
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	121068198	125370360	3375	-1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	125370379	125371138	2	-1.5932
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	125372328	128433699	2073	-0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	128439229	128440966	2	-1.7269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	10	128445385	135225087	3480	-0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	11	456120	134142530	76958	-9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	889902	55505481	28243	0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	55505494	55508556	6	-1.5486
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	55510725	115438771	36174	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	115439578	115440789	2	-2.0578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	115443911	131565653	8729	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	131566545	131568675	5	-1.2268
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	12	131569105	133161346	546	-0.0144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	19450806	40118499	13082	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	40118603	40125453	9	-1.509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	40128025	73080436	17111	4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	73085439	73086549	3	-1.3676
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	73087010	91307434	10907	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	91308039	91314280	5	-1.314
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	13	91314905	114987458	15323	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	14	20501368	105988038	49264	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	15	23687685	90299591	37320	0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	15	90304269	90304431	2	-1.8302
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	15	90304644	101884307	7037	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	16	653459	19458319	8460	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	16	19458934	19460759	3	-1.7871
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	16	19460842	89379936	32188	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	987221	10759270	5006	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	10762200	10767130	8	-0.9603
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	10767349	64999153	23855	-0.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	65000219	65005835	2	-2.1167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	17	65006523	80917016	7970	-7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	18	329586	77109240	42514	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	284018	22899899	8287	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	22902362	22902710	4	-1.1312
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	22903333	28551241	869	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	28551991	28552413	2	-3.4694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	19	28552750	58878226	14700	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	20	455764	62219837	37144	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	21	15347621	47678774	20508	8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	22	17423930	49331012	16868	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	3157107	35053890	13937	6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	35054881	35055575	2	-4.1399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	35061088	98369944	23672	0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	98370229	98370756	2	-4.0597
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	98371203	135200865	16840	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	135201032	135201156	4	-3.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	135201508	144407684	4329	0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	144414774	144416288	2	-4.2783
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_H09_1362208	X	144417264	154905589	4442	-0.0033
